Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03672 and RBAM_022950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence pep-align/BSNT_03672___sipW.1.9828.seq
# -bsequence pep-align/RBAM_022950___sipW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03672___sipW-RBAM_022950___sipW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03672___sipW-RBAM_022950___sipW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03672___sipW
# 2: RBAM_022950___sipW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 139/194 (71.6%)
# Similarity: 164/194 (84.5%)
# Gaps: 4/194 ( 2.1%)
# Score: 711.0
#
#
#=======================================
BSNT_03672___ 1 ----MKLISNILYVIIFTLIIVLTLVVISTRSSGGEPAVFGYTLKSVLSG 46
:||||||||.:||:|||||||.|||||:||||||:|||||||||||
RBAM_022950__ 1 MKKTLKLISNILYAVIFSLIIVLTLTVISTRASGGEPAIFGYTLKSVLSG 50
BSNT_03672___ 47 SMEPEFNTGSLILVKEIADVKELQKGDVITFMQDANTAVTHRIVDITKQG 96
||:|||.|||||.||:|:||.:|:|||||||.||..|||||||:.|||:.
RBAM_022950__ 51 SMDPEFKTGSLIAVKKISDVNDLKKGDVITFTQDDGTAVTHRIIGITKKD 100
BSNT_03672___ 97 DHLLFKTKGDNNAAADSAPVSDENVRAQYTGFQLPYAGYMLHFASQPIGT 146
.:|||:||||:|||.|:|||..|.|.|||||:|||||||::|.|||||||
RBAM_022950__ 101 GNLLFETKGDHNAAPDAAPVQAEKVAAQYTGYQLPYAGYVIHLASQPIGT 150
BSNT_03672___ 147 AVLLIVPGVMLLVYAFVTISSAIREIERKTKALETDTKDSTMST 190
|:||||||||||:|:...|.||:|:|||||||||...|..|:||
RBAM_022950__ 151 AILLIVPGVMLLIYSITVIVSALRDIERKTKALEEHAKKGTIST 194
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