Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03672 and RBAM_022950
See
Amino acid alignment /
Visit
BSNT_03672 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence dna-align/BSNT_03672___sipW.1.9828.seq
# -bsequence dna-align/RBAM_022950___sipW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03672___sipW-RBAM_022950___sipW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03672___sipW-RBAM_022950___sipW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03672___sipW
# 2: RBAM_022950___sipW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 613
# Identity: 413/613 (67.4%)
# Similarity: 413/613 (67.4%)
# Gaps: 68/613 (11.1%)
# Score: 1309.5
#
#
#=======================================
BSNT_03672___ 1 ------------ATGAAGCTGATCAGTAATATTTTATACGTGATCATCTT 38
.||||.|||||||||||||||||.||.|...|||||||
RBAM_022950__ 1 ATGAAAAAAACGCTGAAACTGATCAGTAATATTTTGTATGCCGTCATCTT 50
BSNT_03672___ 39 TA-CTCTTATTATTGTGCTGACACTTGT----CGTGATTTCAACACGTTC 83
.| || |.|||||||||||||| || .||||||||.||.||..|
RBAM_022950__ 51 CAGCT-TGATTATTGTGCTGAC----GTTAACGGTGATTTCGACCCGGGC 95
BSNT_03672___ 84 ATCCGGGGGAGAGCCGGCTGTGTTTGGGTATACATTGAAATCAGTTCTGT 133
.||||||||.||.|||||..|.||.||.|||||..|||||||.||.||||
RBAM_022950__ 96 TTCCGGGGGTGAACCGGCCATCTTCGGCTATACGCTGAAATCCGTGCTGT 145
BSNT_03672___ 134 CAGGTTCGATGGAGCCGGAGTTCAATACAGGTTCCTTAATATTGGTCAAA 183
|.|||||.|||||.|||||.||.||.||.|||||..|.|||..||| |||
RBAM_022950__ 146 CGGGTTCAATGGACCCGGAATTTAAGACGGGTTCGCTCATAGCGGT-AAA 194
BSNT_03672___ 184 G-AAATCGCTGATGTGAAAGAGCTT-CAAAAAGGTGACGTTATTACATTT 231
| ||||..||||.|||||.|| ||| .|||||||.||.||.||.||.|||
RBAM_022950__ 195 GAAAATTTCTGACGTGAATGA-CTTAAAAAAAGGGGATGTGATCACCTTT 243
BSNT_03672___ 232 ATGCAGGATGCAAATACG-----GCGGTCACCCACAGAATTGTTGACATA 276
|.|||.|||| ||| ||.|||||.||||||||..|.|..||.
RBAM_022950__ 244 ACGCAAGATG-----ACGGAACAGCCGTCACACACAGAATAATCGGGATC 288
BSNT_03672___ 277 ACAAAGCAAGGA----GACCATTTGTTATTTAAAACAAAAGGTGATAATA 322
||||| .||||| .||| ||.|.|||.|.||||||||.||..|||
RBAM_022950__ 289 ACAAA-AAAGGACGGGAACC---TGCTGTTTGAGACAAAAGGGGACCATA 334
BSNT_03672___ 323 ATGCAGCAGCTGATTCAGCGCCTGTATC-GGACGAAAATGTTCGC-GCGC 370
||||.||..|.|||.|.||.||.|| || .|..|||||.| |.|| ||.|
RBAM_022950__ 335 ATGCCGCCCCGGATGCCGCACCCGT-TCAAGCTGAAAAAG-TGGCGGCCC 382
BSNT_03672___ 371 AATACACAGGTTTTCAGCTTCCATATGCAGGCTATATGCTTCATTTTGCC 420
|.||.||.||.|.|||||||||.|||||.||.|||.|..|.|||||.|||
RBAM_022950__ 383 AGTATACGGGATATCAGCTTCCGTATGCCGGATATGTCATCCATTTGGCC 432
BSNT_03672___ 421 AGCCAGCCGATTGGAACGGCTGTATTATTGATTGTTCCCGGCGTGATGCT 470
|||||||||||.||||||||..|..|.||.||.|||||||||||.|||||
RBAM_022950__ 433 AGCCAGCCGATCGGAACGGCGATTCTGTTAATCGTTCCCGGCGTCATGCT 482
BSNT_03672___ 471 GTTAGTGTACGCTTTTGTGACGATCAG-------CAGCGCCATTAGAGAA 513
.|| |.|||..|.|..|.||| |||||||.|..|.||.
RBAM_022950__ 483 TTT-------GATTTACTCAATAACAGTCATTGTCAGCGCCCTCCGCGAT 525
BSNT_03672___ 514 ATTGAAAGAAAGACAAAAGCCTTGGAAACAGAT---ACAAAGGACAGCAC 560
|||||..|.||.||.|||||..|||||..|.|| |.||||| |.||
RBAM_022950__ 526 ATTGAGCGGAAAACGAAAGCGCTGGAAGAACATGCGAAAAAGG---GAAC 572
BSNT_03672___ 561 CATGTCTACTTAA 573
|||.||.||.|.|
RBAM_022950__ 573 CATCTCCACATGA 585
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.