Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03668 and RBAM_022910

See DNA alignment / Visit BSNT_03668 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence pep-align/BSNT_03668___yqhG.1.9828.seq
#    -bsequence pep-align/RBAM_022910___yqhG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03668___yqhG-RBAM_022910___yqhG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03668___yqhG-RBAM_022910___yqhG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03668___yqhG
# 2: RBAM_022910___yqhG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     211/264 (79.9%)
# Similarity:   236/264 (89.4%)
# Gaps:           0/264 ( 0.0%)
# Score: 1154.0
# 
#
#=======================================

BSNT_03668___      1 MRQQEVHDFLLRFFQANSCQIVDQGLGYMTVQLTVEMDKQIMNRPFYWHW     50
                     |||||||:||||||:||.|.|.:.|.|:||||||||||||||||||||||
RBAM_022910__      1 MRQQEVHEFLLRFFEANHCPITEHGPGFMTVQLTVEMDKQIMNRPFYWHW     50

BSNT_03668___     51 REKTGGDPNPMKITFITDKENAPKDLDGEFIYFGAPRLFQIFKAVKQNGR    100
                     .|||||:|||||||||||||.||:|:||||||||||||||||:|||||||
RBAM_022910__     51 CEKTGGEPNPMKITFITDKETAPEDMDGEFIYFGAPRLFQIFQAVKQNGR    100

BSNT_03668___    101 FTRMYEKIESAGAKVPLQPWLGINVTISYQSDMKKDKLLSLGLHLVSGTI    150
                     |||:||||.||||:||||||||:||.||||||||||:|||||||||||||
RBAM_022910__    101 FTRIYEKIVSAGARVPLQPWLGLNVVISYQSDMKKDRLLSLGLHLVSGTI    150

BSNT_03668___    151 IEDFQSKLTQLSLTSQICDYCFTISPMIKPESGLKRMENYISKSAMQEPS    200
                     ||.||.||..|.|||||.|||||||||||||||:||||:|:..:|.:|||
RBAM_022910__    151 IEGFQQKLAPLPLTSQISDYCFTISPMIKPESGIKRMEHYLKDAAAKEPS    200

BSNT_03668___    201 DWAEQAVNRWKNDMTLLDKFYEHIEEKPEEYHLEKQALKTLYQPKISVEI    250
                     |||:.|:.|||.|:.|||:|||..|||||||||||||||.||||||.::|
RBAM_022910__    201 DWADSAIARWKKDLRLLDQFYEQTEEKPEEYHLEKQALKALYQPKIHIQI    250

BSNT_03668___    251 ENGGLFYLQNNISS    264
                     ||||||:||:|.|.
RBAM_022910__    251 ENGGLFFLQSNFSG    264


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.