Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_03668 and RBAM_022910

See Amino acid alignment / Visit BSNT_03668 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:57
# Commandline: needle
#    -asequence dna-align/BSNT_03668___yqhG.1.9828.seq
#    -bsequence dna-align/RBAM_022910___yqhG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03668___yqhG-RBAM_022910___yqhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03668___yqhG-RBAM_022910___yqhG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03668___yqhG
# 2: RBAM_022910___yqhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 814
# Identity:     613/814 (75.3%)
# Similarity:   613/814 (75.3%)
# Gaps:          38/814 ( 4.7%)
# Score: 2261.0
# 
#
#=======================================

BSNT_03668___      1 GTGAGACAGCAAGAGGTTCACGATTTTCTGCTGCGTTTTTTTCAAGCAAA     50
                     .||||||||||.|||||||||||.|||.|.|||||.||||||.||||.||
RBAM_022910__      1 ATGAGACAGCAGGAGGTTCACGAATTTTTACTGCGCTTTTTTGAAGCGAA     50

BSNT_03668___     51 CAGCTGCCAAATCGTCGAT-------CAAGGCTTAGGCTATATGACAGTG     93
                     |..|||.|       ||||       ||.||....||.|.||||||.||.
RBAM_022910__     51 CCACTGTC-------CGATTACAGAACACGGGCCGGGTTTTATGACGGTT     93

BSNT_03668___     94 CAGCTTACAGTTGAAATGGACAAACAAATCATGAACCGCCCTTTCTACTG    143
                     |||.|.||.||.||.||||||||||||||.|||||||||||.||.||.||
RBAM_022910__     94 CAGTTGACGGTCGAGATGGACAAACAAATTATGAACCGCCCGTTTTATTG    143

BSNT_03668___    144 GCATTGGCGCGAGAAGACAGGCGGTGATCCGAATCCAATGAAAATCACTT    193
                     |||||||.|.||.||.||.|||||.||.|||||.||.|||||.||.||.|
RBAM_022910__    144 GCATTGGTGTGAAAAAACGGGCGGCGAACCGAACCCGATGAAGATTACGT    193

BSNT_03668___    194 TTATTACAGATAAAGAAAATGCGCCAAAAGACCTAGATGGTGAATTTATA    243
                     |.||.||.||||||||||..||.||..|.||..|.||.||.||||||||.
RBAM_022910__    194 TCATCACTGATAAAGAAACGGCTCCGGAGGATATGGACGGCGAATTTATT    243

BSNT_03668___    244 TATTTTGGGGCCCCGCGTCTTTTTCAAATATTTAAAGCTGTTAAACAAAA    293
                     ||.|||||.||||||||.||.||||||||.|||.||||.|||||||||||
RBAM_022910__    244 TACTTTGGAGCCCCGCGCCTCTTTCAAATCTTTCAAGCAGTTAAACAAAA    293

BSNT_03668___    294 TGGGAGATTTACCAGAATGTATGAGAAAATTGAATCAGCCGGAGCCAAAG    343
                     ||||||||||||.|||||.|||||||||||||.||||||||||||||.||
RBAM_022910__    294 TGGGAGATTTACAAGAATATATGAGAAAATTGTATCAGCCGGAGCCAGAG    343

BSNT_03668___    344 TCCCACTTCAGCCTTGGCTTGGTATAAATGTCACGATTTCATACCAGTCC    393
                     |.||.||||||||.||||||||..|||||||...||||||||||||.|||
RBAM_022910__    344 TGCCGCTTCAGCCCTGGCTTGGATTAAATGTAGTGATTTCATACCAATCC    393

BSNT_03668___    394 GACATGAAAAAGGATA-AGTTATTATCACTAGGTCTTCACCTAGTCTCTG    442
                     |||||||||||.||.| |.|| ||.||..||||.||.||.||.||.||||
RBAM_022910__    394 GACATGAAAAAAGACAGACTT-TTGTCTTTAGGCCTGCATCTTGTTTCTG    442

BSNT_03668___    443 GAACGATAATTGAAGATTTTCAAAGC--AAGCTGACTCAGCTTTCACTGA    490
                     ||||.||.||.||||..||||  |||  |||||..|.|.||||.|.||||
RBAM_022910__    443 GAACAATTATAGAAGGGTTTC--AGCAGAAGCTTGCACCGCTTCCGCTGA    490

BSNT_03668___    491 CATCACAAATATGTGACTATTGCTTCACCATTTCACCTATGATCAAACCA    540
                     |.||.|||||||..|||||||||||.|||||.||.||.|||||.||.||.
RBAM_022910__    491 CCTCGCAAATATCAGACTATTGCTTTACCATATCGCCGATGATTAAGCCG    540

BSNT_03668___    541 GAAAGCGGACTTAAGCGTATGGAAAACTA--TATTTCCAAATCCGCTATG    588
                     |||||||||.||||..|.|||||..|.||  ||     |||..|||  ||
RBAM_022910__    541 GAAAGCGGAATTAAAAGAATGGAGCATTACTTA-----AAAGACGC--TG    583

BSNT_03668___    589 C-----AGGAGCCGTCCGACTGGGCGGAACAG-GCGGTTAACAGGTGGAA    632
                     |     |.||||||||.||||||||.| |||| |||.|...|||.|||||
RBAM_022910__    584 CCGCCAAAGAGCCGTCAGACTGGGCTG-ACAGCGCGATCGCCAGATGGAA    632

BSNT_03668___    633 GAATGATATGACATTGCTTGATAAGTTTTACGAGCATATAGAAGAAAAAC    682
                     .||.||..|.|...||||.|||.|||||||.|||||.|.|||.|||||||
RBAM_022910__    633 AAAGGACCTCAGGCTGCTCGATCAGTTTTATGAGCAGACAGAGGAAAAAC    682

BSNT_03668___    683 CAGAAGAATACCATCTAGAAAAACAGGCGCTGAAAACCTTGTATCAACCA    732
                     |.||.|||||||||.|.||||||||.|||||||||.||||.|||||.||.
RBAM_022910__    683 CTGAGGAATACCATTTGGAAAAACAAGCGCTGAAAGCCTTATATCAGCCG    732

BSNT_03668___    733 AAGATATCA-GTTGAAATTGAAAATGGCGGATTGTTTTATCTGCAAAATA    781
                     ||.|| ||| .||.|.||||||||.|||||.||.||||..|||||||.||
RBAM_022910__    733 AAAAT-TCACATTCAGATTGAAAACGGCGGTTTATTTTTCCTGCAAAGTA    781

BSNT_03668___    782 ATATTTCAAGCTAA    795
                     ||.||||..|.|||
RBAM_022910__    782 ATTTTTCTGGATAA    795


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03668 and RBAM_022910

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
