Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03664 and RBAM_022880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence pep-align/BSNT_03664___gcvPA.1.9828.seq
# -bsequence pep-align/RBAM_022880___gcvPA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03664___gcvPA-RBAM_022880___gcvPA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03664___gcvPA-RBAM_022880___gcvPA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03664___gcvPA
# 2: RBAM_022880___gcvPA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 373/448 (83.3%)
# Similarity: 416/448 (92.9%)
# Gaps: 0/448 ( 0.0%)
# Score: 1964.0
#
#
#=======================================
BSNT_03664___ 1 MKHRYLPATEKDKQEMLATIGVSSIDDLFADIPENVKYKKEYQIKKAKSE 50
||||||||||:||:|||..||..:||:|||||||||:::|:|||||||||
RBAM_022880__ 1 MKHRYLPATEQDKKEMLKAIGAETIDELFADIPENVRFQKDYQIKKAKSE 50
BSNT_03664___ 51 TELTRELTKLASKNCDTVQYASFLGAGVYDHYQPVIVDHVISRSEFYTAY 100
|||||||||||:||.|.|.|||||||||||||||||||||||||||||||
RBAM_022880__ 51 TELTRELTKLAAKNKDAVTYASFLGAGVYDHYQPVIVDHVISRSEFYTAY 100
BSNT_03664___ 101 TPYQPEISQGELQAIFEFQTMICELTGMDIANSSMYDGGTALAEAAMLAS 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022880__ 101 TPYQPEISQGELQAIFEFQTMICELTGMDIANSSMYDGGTALAEAAMLAS 150
BSNT_03664___ 151 GHTKKKKIVVSKTVHPESREVLKTYAKGQYIDVVEVPAADGVTDLDALRQ 200
|||||||||:|..||||||:|||||||||||:||||||.:|||||:||..
RBAM_022880__ 151 GHTKKKKIVISAAVHPESRDVLKTYAKGQYIEVVEVPAKNGVTDLEALEH 200
BSNT_03664___ 201 TVCENTAAVIVQYPNFFGRIEPLKDIEPIAHQGKSMFIVSANPLALGLLT 250
.||:.|||||||||||||:|||||||||:||:|.|..|||:||||||:||
RBAM_022880__ 201 AVCDETAAVIVQYPNFFGQIEPLKDIEPLAHKGNSQLIVSSNPLALGILT 250
BSNT_03664___ 251 PPGKFQSDIVVGDAQPFGIPSAYGGPHCGFFAVTKKLMRKVPGRLVGQTE 300
|||.:.:|||||||||||||:|:||||||:||||||||||||||||||||
RBAM_022880__ 251 PPGAYGADIVVGDAQPFGIPAAFGGPHCGYFAVTKKLMRKVPGRLVGQTE 300
BSNT_03664___ 301 DENGKRGFVLTLQAREQHIRRDKATSNICSNQALNALAASVAMTALGKNG 350
||||:|||||||||||||||||||||||||||||||||||.|||||||||
RBAM_022880__ 301 DENGRRGFVLTLQAREQHIRRDKATSNICSNQALNALAASAAMTALGKNG 350
BSNT_03664___ 351 VKDIARQNLLKANYAKQEAKKAGLTVMFDGPIFNEFVIKLDEPVRAVNKR 400
|||:||||:|||:||:::|:||||.|.|||||||||.::|:.||:..|:|
RBAM_022880__ 351 VKDMARQNILKADYARRQAEKAGLHVAFDGPIFNEFAVRLNLPVKEANRR 400
BSNT_03664___ 401 LLAKGMIGGYDLGLTYPELDCHMLIAVTELRTKEEIDALIQELGDRHE 448
||..|:||||||||.||||:.|||||||||||||:||:||..|||:||
RBAM_022880__ 401 LLQDGIIGGYDLGLAYPELNQHMLIAVTELRTKEKIDSLIARLGDQHE 448
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