Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03660 and RBAM_022850

See DNA alignment / Visit BSNT_03660 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_03660___yqhM.1.9828.seq
#    -bsequence pep-align/RBAM_022850___yqhM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03660___yqhM-RBAM_022850___yqhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03660___yqhM-RBAM_022850___yqhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03660___yqhM
# 2: RBAM_022850___yqhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 278
# Identity:     255/278 (91.7%)
# Similarity:   265/278 (95.3%)
# Gaps:           0/278 ( 0.0%)
# Score: 1343.0
# 
#
#=======================================

BSNT_03660___      1 MQKETWRFIDSGNASPAFNMALDEALLYWHSEKKIPPVIRFYGWNPATLS     50
                     |:|||||||||||.|||||||||||||||||:||||||||||||||||||
RBAM_022850__      1 MEKETWRFIDSGNESPAFNMALDEALLYWHSQKKIPPVIRFYGWNPATLS     50

BSNT_03660___     51 VGYFQNIKKEINFEAVHKYNLGFVRRPTGGRGVLHDQELTYSVIVSEEHP    100
                     |||||||||||||:||||:.||||||||||||||||:||||||||||:||
RBAM_022850__     51 VGYFQNIKKEINFDAVHKHGLGFVRRPTGGRGVLHDKELTYSVIVSEDHP    100

BSNT_03660___    101 EMPATVTEAYRVISEGILQGFRNLGLDAYFAIPRTEKEKESLKNPRSSVC    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
RBAM_022850__    101 EMPATVTEAYRVISEGILQGFRNLGLDANFAIPRTEKEKESLKNPRSSVC    150

BSNT_03660___    151 FDAPSWYELVVEGRKVAGSAQTRQKGVILQHGSILLDLDEDKLFDLFLYP    200
                     |||||||||||||||||||||||||||||||||||||:||||||||||||
RBAM_022850__    151 FDAPSWYELVVEGRKVAGSAQTRQKGVILQHGSILLDIDEDKLFDLFLYP    200

BSNT_03660___    201 SERVRERMQRNFKNKAVAINELTEKRVTMDEARKAFKEGFETGLNIHLEP    250
                     |:||||||||||||||||||.|..|||||||||.|||.|||.||||||||
RBAM_022850__    201 SDRVRERMQRNFKNKAVAINALAPKRVTMDEARIAFKAGFEEGLNIHLEP    250

BSNT_03660___    251 YELSQEELGFVHHLAETKYASDEWNYKR    278
                     |.|:.|||.||:.|||||||||||||||
RBAM_022850__    251 YTLTSEELAFVNELAETKYASDEWNYKR    278


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