Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03656 and RBAM_022830

See DNA alignment / Visit BSNT_03656 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence pep-align/BSNT_03656___yqhO.1.9828.seq
#    -bsequence pep-align/RBAM_022830___yqhO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03656___yqhO-RBAM_022830___yqhO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03656___yqhO-RBAM_022830___yqhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03656___yqhO
# 2: RBAM_022830___yqhO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     245/291 (84.2%)
# Similarity:   277/291 (95.2%)
# Gaps:           0/291 ( 0.0%)
# Score: 1317.0
# 
#
#=======================================

BSNT_03656___      1 MYIDGVFSGGGVKGIALAGAYEVLEEKGFRFKRVAGTSAGAIIAAFIASG     50
                     |.|||||||||:||:|||||||.||||||||:|:||||||||||||||:|
RBAM_022830__      1 MQIDGVFSGGGIKGVALAGAYEALEEKGFRFERLAGTSAGAIIAAFIAAG     50

BSNT_03656___     51 YTSKEIHALIEEVDGEKLLDQRYSFLPLKMLQWVSIYWRLGLYKGDTIEK    100
                     |||:|:|::|:||||.:||||||||||||:|:|||||||||||:||.:||
RBAM_022830__     51 YTSREVHSIIDEVDGRQLLDQRYSFLPLKILRWVSIYWRLGLYRGDMLEK    100

BSNT_03656___    101 WIADLLRAKGIRVFGDLQKGSLRLIASDLTNGTMIVLPDDLARYGLNPDM    150
                     ||||.|:||||..||||:|||||||||||||||||||||||.||||||:|
RBAM_022830__    101 WIADKLKAKGIIAFGDLKKGSLRLIASDLTNGTMIVLPDDLPRYGLNPEM    150

BSNT_03656___    151 FPVARAVRMSCSIPYFFEPIKLKTDTGTATVVDGGVLSNFPIWLFSKERK    200
                     ||||||||||||||||||||||||:.||:|||||||||||||||:|||||
RBAM_022830__    151 FPVARAVRMSCSIPYFFEPIKLKTEKGTSTVVDGGVLSNFPIWLYSKERK    200

BSNT_03656___    201 RPVIGVTLAPRERERPKKNIRNAFELFGALFETMKDAHDARHIASRYEQN    250
                     |||||::|:|.|:|||||:|||||||||||||||||||||||||::||||
RBAM_022830__    201 RPVIGISLSPNEKERPKKSIRNAFELFGALFETMKDAHDARHIATKYEQN    250

BSNT_03656___    251 IIFLPVDGVMATDFHLTQQKKLALIELGKRRTELFLKQWTY    291
                     |||:||:.||||:||||.|||||||||||.|||.|||||:|
RBAM_022830__    251 IIFIPVEHVMATEFHLTPQKKLALIELGKSRTEQFLKQWSY    291


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