Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03653 and RBAM_022800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence pep-align/BSNT_03653___yqhR.1.9828.seq
# -bsequence pep-align/RBAM_022800___yqhR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03653___yqhR-RBAM_022800___yqhR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03653___yqhR-RBAM_022800___yqhR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03653___yqhR
# 2: RBAM_022800___yqhR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 117/181 (64.6%)
# Similarity: 145/181 (80.1%)
# Gaps: 8/181 ( 4.4%)
# Score: 644.5
#
#
#=======================================
BSNT_03653___ 1 MMTSEKDTEQNEELNEKQ---KPPVSMAGRVAATGFCGGVLWSFVAYIAY 47
|||||.:||.|: :|| :.|||..||:...||.|||.||.:.|:.|
RBAM_022800__ 1 -MTSEKHSEQEEK--KKQDDDQQPVSFTGRICGIGFAGGVFWSLIGYLGY 47
BSNT_03653___ 48 LFHFSEISPNMILQPFVLGEWKKHGLGTVISIILIGVISIGAAFLYFLLL 97
:|||||||||||||||::|||||..|||::||::||.|||..||:||:.|
RBAM_022800__ 48 VFHFSEISPNMILQPFMIGEWKKQWLGTMVSIVVIGFISIAGAFIYFVCL 97
BSNT_03653___ 98 KRLKTMWPGILYGLVLWLLVFFVFNPIFPDVRTVTELTSDTIITTICIYL 147
||.||||||::||::||..|||:|||||.||::||||.||||:||:|:|:
RBAM_022800__ 98 KRFKTMWPGMVYGVILWCAVFFLFNPIFEDVKSVTELKSDTIVTTLCLYI 147
BSNT_03653___ 148 LYGLFVGYSISFEYNELNSEKLARALGMHRE 178
||||||||||||.||||.|:|||||||..
RBAM_022800__ 148 LYGLFVGYSISFNYNELTSDKLARALGNK-- 176
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