Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03648 and RBAM_022760

See DNA alignment / Visit BSNT_03648 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_03648___spoIIIAA.1.9828.seq
#    -bsequence pep-align/RBAM_022760___spoIIIAA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03648___spoIIIAA-RBAM_022760___spoIIIAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03648___spoIIIAA-RBAM_022760___spoIIIAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03648___spoIIIAA
# 2: RBAM_022760___spoIIIAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     236/307 (76.9%)
# Similarity:   270/307 (87.9%)
# Gaps:           0/307 ( 0.0%)
# Score: 1241.0
# 
#
#=======================================

BSNT_03648___      1 MNEIAEVLPDSMKNALSEIPEQQWLEIEEVRIRINRPVELIRRGQPVYLS     50
                     ||||.||||:.:::|:|.:||:...:.||:|||::||||||::|||:|||
RBAM_022760__      1 MNEITEVLPELLRDAISAVPEEARRDTEEIRIRVDRPVELIQKGQPLYLS     50

BSNT_03648___     51 YAGTAEDAHLILSRLSNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITEN    100
                     |..||.||.||||||||||||||||||||||:|||||||||||||||.||
RBAM_022760__     51 YVCTAGDAQLILSRLSNYSMYTLEEELKKGYITIRGGHRVGLAGRVIVEN    100

BSNT_03648___    101 GGVKGLRDIASFNIRIARQKLGIAEPLLPYLYQNSWLNTLIIGPPQTGKT    150
                     |.|||||||.||||||||:||||||||:|:|::.:|||||||||||||||
RBAM_022760__    101 GAVKGLRDITSFNIRIAREKLGIAEPLIPFLWKENWLNTLIIGPPQTGKT    150

BSNT_03648___    151 TLLRDLARLSSTGKKNMLPVKTGIVDERSEIAGCLRGIPQHQFGQRIDVL    200
                     |||||||||||||.|.:...|||||||||||||||||||||.||:|||||
RBAM_022760__    151 TLLRDLARLSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFGRRIDVL    200

BSNT_03648___    201 DACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAH    250
                     ||||||||||||||||||:|:||||||||||:.|||||||||||||||||
RBAM_022760__    201 DACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAH    250

BSNT_03648___    251 GWSISDLMKRPSLKRLWEERAFDRYLELSRAKGPGTVSQIYDKDGNVLSR    300
                     ||.:.||:||||||.||||..||||:||||.:||||:|::|.|||..:..
RBAM_022760__    251 GWDMKDLVKRPSLKMLWEENVFDRYVELSRRRGPGTISRMYGKDGEPVPH    300

BSNT_03648___    301 TTGVKTC    307
                     ...|.||
RBAM_022760__    301 AESVMTC    307


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