Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03639 and RBAM_022700

See DNA alignment / Visit BSNT_03639 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence pep-align/BSNT_03639___spoIIIAG.1.9828.seq
#    -bsequence pep-align/RBAM_022700___spoIIIAG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03639___spoIIIAG-RBAM_022700___spoIIIAG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03639___spoIIIAG-RBAM_022700___spoIIIAG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03639___spoIIIAG
# 2: RBAM_022700___spoIIIAG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 230
# Identity:     185/230 (80.4%)
# Similarity:   205/230 (89.1%)
# Gaps:           1/230 ( 0.4%)
# Score: 925.0
# 
#
#=======================================

BSNT_03639___      1 MNKNGLWNVLKKQFLPGQTKDGEKPKLTKYHYFLFVFVLGVSFMLVSQLF     50
                     |||||||.:||||.:.||.|||||||||||||||||||||||||||||||
RBAM_022700__      1 MNKNGLWTILKKQLMIGQAKDGEKPKLTKYHYFLFVFVLGVSFMLVSQLF     50

BSNT_03639___     51 SSPEKTENAKTITAVSSQHSAD-SKEKTAEVFKASKSDKPKDSIDDYEKE     99
                     ||||||...:....|.|..:.| |.:|:|.||||||....|.:|||||::
RBAM_022700__     51 SSPEKTGKDQAAQTVMSGRTEDKSGQKSAPVFKASKDGSAKTTIDDYERD    100

BSNT_03639___    100 YENQLKEILETIIGVDDVSVVVNVDATSLKVYEKNKSNKNTTTEETDKEG    149
                     |||||||||||||||:|||:|||||||||||:||||:.|:||||||||||
RBAM_022700__    101 YENQLKEILETIIGVEDVSIVVNVDATSLKVFEKNKTKKDTTTEETDKEG    150

BSNT_03639___    150 GTRSVTDQTSEEEIVMIKNGDKETPVVVQTKKPDIRGVLVVAQGVDNVQI    199
                     |.||||||||||:||||:|||:||||||||||||||||||||||||||||
RBAM_022700__    151 GKRSVTDQTSEEQIVMIRNGDQETPVVVQTKKPDIRGVLVVAQGVDNVQI    200

BSNT_03639___    200 KQTIIEAVTRVLDVPSHRVAVAPKKIKEDS    229
                     |:|||:||||||||||:|||||||||||||
RBAM_022700__    201 KKTIIDAVTRVLDVPSYRVAVAPKKIKEDS    230


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