Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03639 and RBAM_022700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence dna-align/BSNT_03639___spoIIIAG.1.9828.seq
# -bsequence dna-align/RBAM_022700___spoIIIAG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03639___spoIIIAG-RBAM_022700___spoIIIAG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03639___spoIIIAG-RBAM_022700___spoIIIAG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03639___spoIIIAG
# 2: RBAM_022700___spoIIIAG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 719
# Identity: 545/719 (75.8%)
# Similarity: 545/719 (75.8%)
# Gaps: 55/719 ( 7.6%)
# Score: 2098.0
#
#
#=======================================
BSNT_03639___ 1 ATGAATAAAAACGGATTATGGAATGTATTGAAAAAGCAGTT--TCTTCCG 48
|||||||||||||||.||||||...||.|.|||||.|||.| |..||
RBAM_022700__ 1 ATGAATAAAAACGGACTATGGACCATACTCAAAAAACAGCTGATGATC-- 48
BSNT_03639___ 49 GGACAAACGAAGGACGGCGAAAAGCCGAAGCTGACCAAATATCATTACTT 98
|||||..||||.|||||.|||||.||.||.|||||.||||||||||||||
RBAM_022700__ 49 GGACAGGCGAAAGACGGAGAAAAACCAAAACTGACAAAATATCATTACTT 98
BSNT_03639___ 99 TCTATTCGTTTTTGTTCTCGGAGTTTCCTTTATGCTTGTCAGCCAGCTGT 148
|||.|||||.|||||.|||||.||.||.||||||||.|||||||||||||
RBAM_022700__ 99 TCTGTTCGTGTTTGTGCTCGGGGTATCTTTTATGCTGGTCAGCCAGCTGT 148
BSNT_03639___ 149 TTTCTTCACCTGAGAAAACTGAAAACG-CCAA---------AACGATAA- 187
|.||||||||.||||||||.|..||.| |||| |.|| |.|
RBAM_022700__ 149 TCTCTTCACCGGAGAAAACCGGGAAGGACCAAGCGGCGCAGACCG-TCAT 197
BSNT_03639___ 188 ---CGGCCGTATCATCACAACATTCCGCAGACAGCAAAGAG---AAAACA 231
||||||.| |.|.||||| ||||.| ||||.|
RBAM_022700__ 198 GTCCGGCCGAA-------------CGGAAGACA--AAAGCGGGCAAAAAA 232
BSNT_03639___ 232 GCCGAA---GTGTTTAAAGCCTCAAAATCTGATAAAC-------CTAAAG 271
| ||.| ||.|||||.||.|| ||.|.|| |.|||.
RBAM_022700__ 233 G-CGCACCCGTTTTTAAGGCATC-------GAAAGACGGCAGCGCAAAAA 274
BSNT_03639___ 272 ACTCGATCGATGACTATGAAAAAGAATACGAAAATCAGCTGAAAGAAATC 321
.|.||||||||||.||.||||.|||.||.|||||.|||||||||||||||
RBAM_022700__ 275 CCACGATCGATGATTACGAAAGAGACTATGAAAACCAGCTGAAAGAAATC 324
BSNT_03639___ 322 CTTGAAACAATCATTGGTGTGGACGATGTCTCGGTTGTCGTGAATGTAGA 371
||||||||.||.||.||.|||||.||||||||..|||||||.||.|||||
RBAM_022700__ 325 CTTGAAACGATTATCGGCGTGGAGGATGTCTCAATTGTCGTAAACGTAGA 374
BSNT_03639___ 372 TGCAACGTCGCTGAAAGTATACGAAAAAAACAAATCAAACAAAAATACAA 421
.|||||.||..|||||||.|..||.|||||.|||.|.||.|||.|.||.|
RBAM_022700__ 375 CGCAACATCTTTGAAAGTGTTTGAGAAAAATAAAACGAAAAAAGACACCA 424
BSNT_03639___ 422 CCACTGAAGAAACTGACAAAGAAGGCGGAACAAGAAGCGTTACAGACCAA 471
|||||||||||||.||.|||||||||||.|.|||||||||.||.||.|||
RBAM_022700__ 425 CCACTGAAGAAACCGATAAAGAAGGCGGCAAAAGAAGCGTAACCGATCAA 474
BSNT_03639___ 472 ACATCGGAGGAAGAAATCGTCATGATCAAAAACGGCGATAAAGAAACACC 521
||.||.||.|||.||||.||||||||...||||||.|||.|.|||||.||
RBAM_022700__ 475 ACCTCTGAAGAACAAATTGTCATGATTCGAAACGGGGATCAGGAAACCCC 524
BSNT_03639___ 522 TGTCGTCGTCCAAACGAAAAAACCTGATATACGCGGTGTACTCGTTGTTG 571
.|||||||||||.||||||||.||.|||||.|||||||||||||||||.|
RBAM_022700__ 525 GGTCGTCGTCCAGACGAAAAAGCCCGATATCCGCGGTGTACTCGTTGTCG 574
BSNT_03639___ 572 CTCAAGGAGTGGACAACGTTCAAATAAAACAAACCATTATCGAAGCGGTG 621
||||.||||||||||||||||||||||||.|||||||.||.||.||.||.
RBAM_022700__ 575 CTCAGGGAGTGGACAACGTTCAAATAAAAAAAACCATCATTGATGCCGTC 624
BSNT_03639___ 622 ACACGGGTCCTGGATGTTCCAAGCCACCGGGTTGCGGTTGCCCCTAAAAA 671
|||.||||.||.||||||||.|||.|.||.||.|||||||||||||||||
RBAM_022700__ 625 ACAAGGGTGCTCGATGTTCCGAGCTATCGTGTAGCGGTTGCCCCTAAAAA 674
BSNT_03639___ 672 AATAAAGGAGGATTCATAA 690
|||.|||||||||||||||
RBAM_022700__ 675 AATCAAGGAGGATTCATAA 693
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