Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03623 and RBAM_022630
See
DNA alignment /
Visit
BSNT_03623 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence pep-align/BSNT_03623___xseA.1.9828.seq
# -bsequence pep-align/RBAM_022630___xseA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03623___xseA-RBAM_022630___xseA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03623___xseA-RBAM_022630___xseA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03623___xseA
# 2: RBAM_022630___xseA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 390/460 (84.8%)
# Similarity: 422/460 (91.7%)
# Gaps: 7/460 ( 1.5%)
# Score: 2001.0
#
#
#=======================================
BSNT_03623___ 1 MVQECLGEEFLDMGEAAYVTVSALTKYIKRKFDVDPHLENIWIKGELSNV 50
.:...||.|||||||||||||||||||||||||:||||||||||
RBAM_022630__ 1 ------MKGVQDMSEAAYVTVSALTKYIKRKFDVDPHLEDIWIKGELSNV 44
BSNT_03623___ 51 KIHTRGHIYFTLKDENARMQSVMFARQSERLPFKPENGMKVLVRGGISVY 100
|||||||||||||||:||||:|||.|||.||.||||:||||:||||||||
RBAM_022630__ 45 KIHTRGHIYFTLKDEHARMQAVMFQRQSSRLAFKPEDGMKVIVRGGISVY 94
BSNT_03623___ 101 EPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLFDDRYKKQIPAFP 150
||||:||||||||||||||||||||||||||||||||||||:|:.|||||
RBAM_022630__ 95 EPSGSYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLFDDRHKQAIPAFP 144
BSNT_03623___ 151 ATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVTRI 200
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_022630__ 145 ATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVKRI 194
BSNT_03623___ 201 EEANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHE 250
||||.:::|||||||||||||||||||||||||||||||.||||||||||
RBAM_022630__ 195 EEANAQKMCDVLIVGRGGGSIEELWAFNEEIVARAIFASAIPIISAVGHE 244
BSNT_03623___ 251 TDFTISDFVADIRAATPTGAAEIAVPHTTDLIERAKTAEVRMTRAMQQHL 300
|||||||||||||||||||||||||||||||:||.||||||:|||||||:
RBAM_022630__ 245 TDFTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHI 294
BSNT_03623___ 301 GQKKERIQTLQSSYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSR 350
.:||||:|:||||||||||||||.||||||||.|||||:|||.|.|||.|
RBAM_022630__ 295 SKKKERVQSLQSSYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQR 344
BSNT_03623___ 351 QLERETYRLEALHPHEQLKQARTRYQEQTNQLRKNMNIQMKQLHSQFQTV 400
||||.||||.||||..|||||:.||:|::|||.::||:|:||||||||||
RBAM_022630__ 345 QLERNTYRLTALHPETQLKQAKKRYEERSNQLARSMNVQLKQLHSQFQTV 394
BSNT_03623___ 401 LGKLNALSPLQVMERGYSLAYKEDKLIKSVSQIEEQDRLEVKLKDGVLTC 450
||||||||||||||||||||||:.||||||.|:|:.|.||||:.||||||
RBAM_022630__ 395 LGKLNALSPLQVMERGYSLAYKDKKLIKSVDQVEQNDTLEVKMTDGVLTC 444
BSNT_03623___ 451 EVLEKRGEEK 460
|||:||||.
RBAM_022630__ 445 EVLQKRGER- 453
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.