Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03623 and RBAM_022630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03623___xseA.1.9828.seq
# -bsequence dna-align/RBAM_022630___xseA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03623___xseA-RBAM_022630___xseA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03623___xseA-RBAM_022630___xseA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03623___xseA
# 2: RBAM_022630___xseA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1399
# Identity: 1071/1399 (76.6%)
# Similarity: 1071/1399 (76.6%)
# Gaps: 53/1399 ( 3.8%)
# Score: 4101.0
#
#
#=======================================
BSNT_03623___ 1 ATGGTGCAGGAATGCTTAGGAGAGGAGTTTTTAGACATGGGTGAAGCAGC 50
|.||| |||||.|.|| ||.|||.|||||||.||
RBAM_022630__ 1 -------ATGAA-----AGGAGTGCAG------GATATGAGTGAAGCGGC 32
BSNT_03623___ 51 GTATGTGACCGTCTCAGCGCTGACAAAGTATATAAAACGAAAATTCGATG 100
.|||||.||.||.||.||||||||.||.||.||.||||||||||||||||
RBAM_022630__ 33 ATATGTCACGGTTTCCGCGCTGACCAAATACATTAAACGAAAATTCGATG 82
BSNT_03623___ 101 TAGATCCTCACCTTGAAAATATTTGGATTAAAGGCGAATTGTCGAATGTA 150
|.||.|||||.||||||.|.|||||||||||.||.||..|.||.|||||.
RBAM_022630__ 83 TGGACCCTCATCTTGAAGACATTTGGATTAAGGGTGAGCTCTCCAATGTT 132
BSNT_03623___ 151 AAGATACACACACGAGGGCATATTTATTTCACTTTAAAAGACGAAAACGC 200
||.||.||.||..||||.||.||.|||||.||.||||||||.||..|.||
RBAM_022630__ 133 AAAATTCATACGAGAGGCCACATCTATTTTACATTAAAAGATGAGCATGC 182
BSNT_03623___ 201 AAGAATGCAGTCGGTGATGTTCGCGAGACAAAG--CGAGCGTCTGCCTTT 248
..|.||||||.|.||.|||||...|||.||||| ||| |.||..|.||
RBAM_022630__ 183 CCGCATGCAGGCCGTCATGTTTCAGAGGCAAAGTTCGA--GGCTTGCGTT 230
BSNT_03623___ 249 TAAACCTGAAAACGGAATGAAAGTGCTGGTCAGAGGCGGAATTTCCGTAT 298
|||.||.|||.||||||||||.||..|.||.||||||||.||.|||||.|
RBAM_022630__ 231 TAAGCCAGAAGACGGAATGAAGGTCATCGTAAGAGGCGGCATCTCCGTCT 280
BSNT_03623___ 299 ATGAACCGAGCGGAAACTATCAATTATATGCCAAAGAAATGCAGCCTGAC 348
|||||||||||||||.||||||..|.||.||.||||||||||||||.|||
RBAM_022630__ 281 ATGAACCGAGCGGAAGCTATCAGCTGTACGCGAAAGAAATGCAGCCGGAC 330
BSNT_03623___ 349 GGGGTTGGAGCGCTTTATTTAGCGTACGAAGAATTAAAAAAGAAGCTTGC 398
||.||.||.|||||.||.|||||.||.|||||||||||.||.||.|||||
RBAM_022630__ 331 GGTGTGGGGGCGCTCTACTTAGCATATGAAGAATTAAAGAAAAAACTTGC 380
BSNT_03623___ 399 CGGAGAAGGTTTATTTGACGACC-GCTACAAAAAACA---AATCCCCGCA 444
|||.|||||.||.|||||.|||| || |.||.|| .||||||||.
RBAM_022630__ 381 CGGCGAAGGGTTGTTTGATGACCGGC----ATAAGCAGGCCATCCCCGCT 426
BSNT_03623___ 445 TTTCCAGCCACAATCGGGGTTGTGACATCTCCAACGGGTGCCGCTGTCAG 494
|||||.|||||.||||||||.||.||.||.||.|||||.||.||.|||||
RBAM_022630__ 427 TTTCCGGCCACGATCGGGGTCGTCACGTCACCGACGGGAGCAGCCGTCAG 476
BSNT_03623___ 495 AGACGTTATTACAACTCTAAAAAGAAGATATCCCCTTGTAAAAGTCATTG 544
||||||.|||||.||.||.|||||||||||.||||||||.||||||||||
RBAM_022630__ 477 AGACGTCATTACCACACTCAAAAGAAGATACCCCCTTGTGAAAGTCATTG 526
BSNT_03623___ 545 TTCTTCCAGCGCTCGTACAAGGTGAAAATGCGAGCAGATCCATCGTTACG 594
|.|||||.||||||||.||||||||||||||.||||||||.||.||.|.|
RBAM_022630__ 527 TGCTTCCCGCGCTCGTTCAAGGTGAAAATGCCAGCAGATCGATTGTGAAG 576
BSNT_03623___ 595 CGCATTGAAGAGGCAAATGAAAAAGAGATTTGCGACGTATTAATTGTCGG 644
|||||||||||.||.||||.|.||.|.||.||.|||||..|.||.|||||
RBAM_022630__ 577 CGCATTGAAGAAGCCAATGCACAAAAAATGTGTGACGTCCTGATCGTCGG 626
BSNT_03623___ 645 GAGAGGCGGCGGTTCGATAGAAGAACTGTGGGCATTCAATGAAGAAATTG 694
.||.||.||.||.|||||.||||||.||||||||||.||.||||||||.|
RBAM_022630__ 627 AAGGGGAGGGGGCTCGATCGAAGAATTGTGGGCATTTAACGAAGAAATCG 676
BSNT_03623___ 695 TAGCACGCGCCATCTTTGCTTCCAATATTCCGATTATATCGGCAGTCGGA 744
|.||.||.||.||.|||||||||...||||||||||||||.||.||||||
RBAM_022630__ 677 TGGCCCGGGCGATTTTTGCTTCCGCCATTCCGATTATATCAGCCGTCGGA 726
BSNT_03623___ 745 CATGAGACGGATTTTACGATCAGTGATTTTGTCGCCGATATCAGAGCCGC 794
|||||.||.||||||||.|||||||||||.|||||.||||||.|.||.||
RBAM_022630__ 727 CATGAAACAGATTTTACAATCAGTGATTTCGTCGCGGATATCCGGGCGGC 776
BSNT_03623___ 795 GACGCCGACAGGAGCAGCTGAGATTGCTGTGCCTCATACCACTGATTTAA 844
.||||||||||||||.||.||.||.||.||.||.||.||.||.||.||||
RBAM_022630__ 777 AACGCCGACAGGAGCGGCAGAAATCGCCGTCCCCCACACGACGGACTTAA 826
BSNT_03623___ 845 TCGAACGGGCAAAAACAGCGGAAGTCAGAATGACAAGAGCAATGCAGCAG 894
|.||||||.|||||||.|||||||||.|..||||||||||.|||||||||
RBAM_022630__ 827 TGGAACGGACAAAAACGGCGGAAGTCCGCCTGACAAGAGCGATGCAGCAG 876
BSNT_03623___ 895 CACCTCGGCCAGAAAAAAGAACGGATTCAAACGCTGCAATCGTCCTATGC 944
||..||.||.||||||||||||||.|||||.||||.||.||.|||||.||
RBAM_022630__ 877 CATATCAGCAAGAAAAAAGAACGGGTTCAATCGCTCCAGTCATCCTACGC 926
BSNT_03623___ 945 CTTTCGTTTTCCAAAGCGTTTGTATGCGCAAAAAGAGCAGCAGTTTGACC 994
.||.||||||||.||.||.||||||.|.||||||||.|||||||||||||
RBAM_022630__ 927 GTTCCGTTTTCCGAAACGATTGTATACCCAAAAAGAACAGCAGTTTGACC 976
BSNT_03623___ 995 TCGCGTACCAGCAGTTTCAAGCACAGCTGACCGCTCTTTTAGATCGGAAA 1044
|...|||.||||||||.||..|||||||.||.|..|||...||..|||||
RBAM_022630__ 977 TTTTGTATCAGCAGTTCCAGTCACAGCTCACAGGGCTTACGGACAGGAAA 1026
BSNT_03623___ 1045 AGCAGACAGCTGGAGCGTGAA-ACGTACAGATTAGAGGCACTGCATCCTC 1093
...||.||||||||||| ||| ||||||||||||..|||.||.||.||
RBAM_022630__ 1027 CAAAGGCAGCTGGAGCG-GAATACGTACAGATTAACGGCGCTCCACCC-- 1073
BSNT_03623___ 1094 ATGAA---CAGCTGAAACAAGCGAGAACACGATACCAGGAACAAACAAAT 1140
|||| |||||||||||.||||.||.|||.|||.||||.|...|||||
RBAM_022630__ 1074 -TGAAACCCAGCTGAAACAGGCGAAAAAACGGTACGAGGAGCGCTCAAAT 1122
BSNT_03623___ 1141 CAGCT-----GAGAAAAAATATGAATATCCAAATGAAGCAGCTGCATTCC 1185
||||| | ||..||||||.||||..||||||||||.|||||.
RBAM_022630__ 1123 CAGCTCGCCCG-----AAGCATGAATGTCCAGCTGAAGCAGCTTCATTCG 1167
BSNT_03623___ 1186 CAATTTCAAACCGTTCTTGGCAAGCTGAATGCACTAAGTCCTCTTCAAGT 1235
||.|||||.||.||||||||.||.|||||||||.|||||||.|||||.||
RBAM_022630__ 1168 CAGTTTCAGACGGTTCTTGGTAAACTGAATGCATTAAGTCCCCTTCAGGT 1217
BSNT_03623___ 1236 GATGGAAAGAGGATACAGCTTGGCTTATAAAGAAGATAAACTCATTAAAA 1285
||||||.|||||||||||..||||.||||||||..|.||.||.||.||||
RBAM_022630__ 1218 GATGGAGAGAGGATACAGTCTGGCCTATAAAGACAAAAAGCTGATCAAAA 1267
BSNT_03623___ 1286 GTGTCAGTCAAATAGAAGAGCAGGACCGGCTTGAAGTCAAGCTGAAGGAT 1335
|.||...||||.|.|||.|..|.||...|||||||||.|||.|||..||.
RBAM_022630__ 1268 GCGTTGATCAAGTGGAACAAAATGATACGCTTGAAGTAAAGATGACAGAC 1317
BSNT_03623___ 1336 GGCGTGCTGACCTGTGAAGTATTAGAAAAGAGAGGGGAA-GAAAAATGA 1383
|||||.|||||.|||||||||||..||||||||||.||| ||.||
RBAM_022630__ 1318 GGCGTTCTGACGTGTGAAGTATTGCAAAAGAGAGGCGAACGATAA---- 1362
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