Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03617 and RBAM_022590

See DNA alignment / Visit BSNT_03617 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence pep-align/BSNT_03617.1.9828.seq
#    -bsequence pep-align/RBAM_022590___yqxC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03617-RBAM_022590___yqxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03617-RBAM_022590___yqxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03617
# 2: RBAM_022590___yqxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     204/281 (72.6%)
# Similarity:   222/281 (79.0%)
# Gaps:          39/281 (13.9%)
# Score: 1065.0
# 
#
#=======================================

BSNT_03617         1 ---------------------------------------MDKPGEKIDRD     11
                                                            :|||||||.||
RBAM_022590__      1 MTAKKERLDVLLVEKGLAETREKAKRAIMAGIVYSNENRLDKPGEKIARD     50

BSNT_03617        12 LPLTVKGNPLRYVSRGGLKLEKALKEFPVSVKDKIMIDIGSSTGGFTDCA     61
                     ||||||||||:|||||||||||||:.||||||.|.|||||||||||||||
RBAM_022590__     51 LPLTVKGNPLKYVSRGGLKLEKALEVFPVSVKGKTMIDIGSSTGGFTDCA    100

BSNT_03617        62 LQNGAKQSYAVDVGYNQLAWKLRQDERVVVMERTNFRYATPADFTKGMPE    111
                     |||||::|||||||||||||||||||||||||||||||:.|:|||:|:||
RBAM_022590__    101 LQNGAERSYAVDVGYNQLAWKLRQDERVVVMERTNFRYSEPSDFTEGLPE    150

BSNT_03617       112 FATIDVSFISLRLILPVLRTLLVPGSDCMALVKPQFEAGRESVGKKGIVR    161
                     ||||||||||||||||||:|||||||||:|||||||||||||||||||||
RBAM_022590__    151 FATIDVSFISLRLILPVLKTLLVPGSDCIALVKPQFEAGRESVGKKGIVR    200

BSNT_03617       162 DPKVHADVLKRMISFSAAEGYICKGLSFSPITGGDGNIEFLLHLHWPGEG    211
                     ||.||.|||:||..|:|:|||..|||||||||||||||||||||.|.||.
RBAM_022590__    201 DPGVHTDVLRRMNQFAASEGYTVKGLSFSPITGGDGNIEFLLHLEWGGED    250

BSNT_03617       212 QDGQELPEEEIMRVVEEAHKTLKEKKADVPE    242
                     .:|.|||||:|:|.|.|||:|||.||.||||
RBAM_022590__    251 GNGAELPEEDILRTVREAHETLKAKKTDVPE    281


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