Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02911 and RBAM_022540

See DNA alignment / Visit BSNT_02911 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:47
# Commandline: needle
#    -asequence pep-align/BSNT_02911___yncD.1.9828.seq
#    -bsequence pep-align/RBAM_022540___yncD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02911___yncD-RBAM_022540___yncD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02911___yncD-RBAM_022540___yncD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02911___yncD
# 2: RBAM_022540___yncD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity:     331/395 (83.8%)
# Similarity:   361/395 (91.4%)
# Gaps:           2/395 ( 0.5%)
# Score: 1696.0
# 
#
#=======================================

BSNT_02911___      1 MMIKLCREVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIE     50
                      |.||||||||||:|||:|||:||||||||:.||||||||||.|||||:|
RBAM_022540__      1 -MKKLCREVWIEVDLDAIKKNVRAIRRHIPNTSKIMAVVKANAYGHGSVE     49

BSNT_02911___     51 VARHALEHGASELAVASVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAW    100
                     |||.|||.|||||||||||||||||:|||||||||||||:||||||||.|
RBAM_022540__     50 VARQALESGASELAVASVEEGIVLRRAGITAPILVLGFTALSCVKKSAVW     99

BSNT_02911___    101 NITLSAFQVDWMKEANEILEKEASANRLAIHINVDTGMGRLGVRTKEELL    150
                     |||||||||.|:|:||.||||||.:.||:||||||||||||||||:|:||
RBAM_022540__    100 NITLSAFQVSWIKKANRILEKEADSKRLSIHINVDTGMGRLGVRTEEDLL    149

BSNT_02911___    151 EVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQHEKFISFLSFLKKQG    200
                     .||||||:|.:|.|.||||||||||||||.||.||||||||||.|||.|.
RBAM_022540__    150 AVVKALKSSTYLSWDGIFTHFSTADEPDTELTMLQHEKFISFLRFLKNQD    199

BSNT_02911___    201 IELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLVKLEP    250
                     |.||||||||||||||||||||||||||||||||||||.||:||||.|.|
RBAM_022540__    200 ITLPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSASIKELNLVDLTP    249

BSNT_02911___    251 ALSLKARIAYVKTMRTEPRTVSYGATYVAEPNEVIATLPIGYADGYSRAL    300
                     ||||||||||||.|.|:||||||||||:|||.|:|||:||||.|||||||
RBAM_022540__    250 ALSLKARIAYVKAMVTDPRTVSYGATYIAEPGEIIATIPIGYGDGYSRAL    299

BSNT_02911___    301 SNRGFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAE    350
                     |||||:||||:|||||||||||||||||||| |||||:||||||||:|||
RBAM_022540__    300 SNRGFILHRGRRVPVAGRVTMDMIMVSLGEN-EGKQGEEVVIYGKQQGAE    348

BSNT_02911___    351 ISVDEVAEMLNTINYEVVSTLSRRIPRFYIRDGEIFKVSTPVLYV    395
                     |||||:||||.||:|||:|.||||:||||.|||:|.|:|.|||||
RBAM_022540__    349 ISVDEIAEMLGTISYEVLSVLSRRVPRFYFRDGKIIKISAPVLYV    393


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