Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02911 and RBAM_022540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence pep-align/BSNT_02911___yncD.1.9828.seq
# -bsequence pep-align/RBAM_022540___yncD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02911___yncD-RBAM_022540___yncD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02911___yncD-RBAM_022540___yncD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02911___yncD
# 2: RBAM_022540___yncD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 331/395 (83.8%)
# Similarity: 361/395 (91.4%)
# Gaps: 2/395 ( 0.5%)
# Score: 1696.0
#
#
#=======================================
BSNT_02911___ 1 MMIKLCREVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIE 50
|.||||||||||:|||:|||:||||||||:.||||||||||.|||||:|
RBAM_022540__ 1 -MKKLCREVWIEVDLDAIKKNVRAIRRHIPNTSKIMAVVKANAYGHGSVE 49
BSNT_02911___ 51 VARHALEHGASELAVASVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAW 100
|||.|||.|||||||||||||||||:|||||||||||||:||||||||.|
RBAM_022540__ 50 VARQALESGASELAVASVEEGIVLRRAGITAPILVLGFTALSCVKKSAVW 99
BSNT_02911___ 101 NITLSAFQVDWMKEANEILEKEASANRLAIHINVDTGMGRLGVRTKEELL 150
|||||||||.|:|:||.||||||.:.||:||||||||||||||||:|:||
RBAM_022540__ 100 NITLSAFQVSWIKKANRILEKEADSKRLSIHINVDTGMGRLGVRTEEDLL 149
BSNT_02911___ 151 EVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQHEKFISFLSFLKKQG 200
.||||||:|.:|.|.||||||||||||||.||.||||||||||.|||.|.
RBAM_022540__ 150 AVVKALKSSTYLSWDGIFTHFSTADEPDTELTMLQHEKFISFLRFLKNQD 199
BSNT_02911___ 201 IELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLVKLEP 250
|.||||||||||||||||||||||||||||||||||||.||:||||.|.|
RBAM_022540__ 200 ITLPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSASIKELNLVDLTP 249
BSNT_02911___ 251 ALSLKARIAYVKTMRTEPRTVSYGATYVAEPNEVIATLPIGYADGYSRAL 300
||||||||||||.|.|:||||||||||:|||.|:|||:||||.|||||||
RBAM_022540__ 250 ALSLKARIAYVKAMVTDPRTVSYGATYIAEPGEIIATIPIGYGDGYSRAL 299
BSNT_02911___ 301 SNRGFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAE 350
|||||:||||:|||||||||||||||||||| |||||:||||||||:|||
RBAM_022540__ 300 SNRGFILHRGRRVPVAGRVTMDMIMVSLGEN-EGKQGEEVVIYGKQQGAE 348
BSNT_02911___ 351 ISVDEVAEMLNTINYEVVSTLSRRIPRFYIRDGEIFKVSTPVLYV 395
|||||:||||.||:|||:|.||||:||||.|||:|.|:|.|||||
RBAM_022540__ 349 ISVDEIAEMLGTISYEVLSVLSRRVPRFYFRDGKIIKISAPVLYV 393
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