Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03604 and RBAM_022510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_03604.1.9828.seq
# -bsequence pep-align/RBAM_022510.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03604-RBAM_022510.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03604-RBAM_022510.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03604
# 2: RBAM_022510
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity: 34/116 (29.3%)
# Similarity: 36/116 (31.0%)
# Gaps: 66/116 (56.9%)
# Score: 155.0
#
#
#=======================================
BSNT_03604 0 -------------------------------------------------- 0
RBAM_022510 1 MIHQPNKKEGVFYGQQHSCGSVRSVKCCDSDRNDIRRRKVEKRINKNKLT 50
BSNT_03604 1 ---------------MKEVKAMKKFVLLLAAAVITCSIGHQISGGYKGPE 35
.||...|||.:||.|||||..|||||||||||.||
RBAM_022510 51 VFSHKRMLINNLVKDKKEDMYMKKIILLFAAAVIFSSIGHQISGGYKDPE 100
BSNT_03604 36 KERRKHHSALKIFSR- 50
|||||...:.|.|||
RBAM_022510 101 KERRKPFHSFKWFSRS 116
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