Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03602 and RBAM_022480

See DNA alignment / Visit BSNT_03602 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_03602___yqiH.1.9828.seq
#    -bsequence pep-align/RBAM_022480___yqiH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03602___yqiH-RBAM_022480___yqiH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03602___yqiH-RBAM_022480___yqiH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03602___yqiH
# 2: RBAM_022480___yqiH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 99
# Identity:      45/99 (45.5%)
# Similarity:    64/99 (64.6%)
# Gaps:           3/99 ( 3.0%)
# Score: 222.5
# 
#
#=======================================

BSNT_03602___      1 MKQTVLLLFTALFLSGCSVASADDSVPRFTEEGKYIGSADPHTIAVSLNG     50
                     ||..:||:|||..||||...:..|:.|.||:||.:|.:|...||||.::|
RBAM_022480__      1 MKSIILLIFTAWLLSGCEYTAEADAAPSFTQEGTFIKAAGNDTIAVEIDG     50

BSNT_03602___     51 EETMIQVPKDKRDECESLPDQTHVLVKYTKKDNGTLQLEDIQLRKNSS-     98
                     |...::||..||.||:|||:.|.|.:.|.|:.||.|:||  :|:|.:. 
RBAM_022480__     51 ERQEVKVPFAKRFECQSLPEHTAVQITYKKESNGQLRLE--ELKKETDM     97


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