Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03600 and RBAM_022460

See DNA alignment / Visit BSNT_03600 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_03600___yqiK.1.9828.seq
#    -bsequence pep-align/RBAM_022460___yqiK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03600___yqiK-RBAM_022460___yqiK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03600___yqiK-RBAM_022460___yqiK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03600___yqiK
# 2: RBAM_022460___yqiK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     157/246 (63.8%)
# Similarity:   197/246 (80.1%)
# Gaps:           4/246 ( 1.6%)
# Score: 819.0
# 
#
#=======================================

BSNT_03600___      1 MTKIFAHRGASGQFPENTMLAFEKGIEAGADGIELDVQLTKDGRIVVIHD     50
                     ||.|||||||||..|||||.||:|.||.||||||||||:|||||||||||
RBAM_022460__      1 MTNIFAHRGASGDCPENTMPAFKKAIEDGADGIELDVQMTKDGRIVVIHD     50

BSNT_03600___     51 ERLNRTTSLKGFVKDTTYDEVKTANAAAGHDQAYSDIKVPLLEDVLSWAV    100
                     |.|:||||||||||||.||:::||:||.....|:..:::|||.|||.:|.
RBAM_022460__     51 ETLDRTTSLKGFVKDTAYDKIRTADAAGKWKDAFKGVRIPLLSDVLRFAE    100

BSNT_03600___    101 KKDFLINIELKNSVIRYEGMEEKVLEAVKRFNVEDRVILSTFNHDSLALC    150
                     :.||||||||||||.|||||||:|::.|:.:.:|.|||.|:|||:|||:|
RBAM_022460__    101 RADFLINIELKNSVFRYEGMEEEVIKKVRYYGLEKRVIFSSFNHESLAVC    150

BSNT_03600___    151 ARLAPHIERAVLTSDVLYQADRYIASIPASGYHPKLNSPGVTDEVLKKMR    200
                     ..|||.|||||||.||||:.:||:|:||||||||||.:|.|:.||:|.:.
RBAM_022460__    151 HALAPEIERAVLTMDVLYRPERYLAAIPASGYHPKLGTPAVSAEVIKHLA    200

BSNT_03600___    201 NGLIKVRPYTVNRPEDMKRLIEAGADGMFTDFPEKASALLKNE---    243
                     .....:||:|||||||||::::||||.:|||:| |.:..:|.|   
RBAM_022460__    201 KHQAALRPFTVNRPEDMKQMMKAGADAIFTDYP-KLAVSIKEECRS    245


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