Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03596 and RBAM_022440

See DNA alignment / Visit BSNT_03596 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:52
# Commandline: needle
#    -asequence pep-align/BSNT_03596.1.9828.seq
#    -bsequence pep-align/RBAM_022440___mmgB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03596-RBAM_022440___mmgB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03596-RBAM_022440___mmgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03596
# 2: RBAM_022440___mmgB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     205/287 (71.4%)
# Similarity:   237/287 (82.6%)
# Gaps:           4/287 ( 1.4%)
# Score: 1073.0
# 
#
#=======================================

BSNT_03596         1 MEIKQIMVAGAGQMGSGIAQTAADAGFYVRMYDVNPEAAEAGLKRLKKQL     50
                     |::|.||||||||||:|||||||:|||.|::||..||....||.|:|..|
RBAM_022440__      1 MKMKTIMVAGAGQMGAGIAQTAAEAGFAVKLYDWEPETVTKGLHRIKTNL     50

BSNT_03596        51 ARDAEKGKRTETEVKSVISRISISQTLEEAEHADIVIEAIAENMAAKTEM    100
                     .::..||:::..|..:|.||||.:: |.|||.||.:|||||||..||.|:
RBAM_022440__     51 EKEQAKGRKSRQETDAVFSRISPAE-LTEAEDADFIIEAIAENKKAKAEL     99

BSNT_03596       101 FKTLDRICPPHTILASNTSSLPITEIAAVTNRPQRVIGMHFMNPVPVMKL    150
                     |.|||:|||||.:||||||||||||:||.|.||::|||||||||||||:|
RBAM_022440__    100 FDTLDKICPPHAVLASNTSSLPITELAAATKRPEKVIGMHFMNPVPVMEL    149

BSNT_03596       151 VEVIRGLATSEETALDVMALAEKMGKTAVEVNDFPGFVSNRVLLPMINEA    200
                     ||||||||||||||..|..||.:|.||.|||||||||:|||:|:||||||
RBAM_022440__    150 VEVIRGLATSEETAETVKKLAVRMNKTPVEVNDFPGFISNRILMPMINEA    199

BSNT_03596       201 IYCVYEGVAKPEAIDEVMKLGMNHPMGPLALADFIGLDTCLSIMEVLHSG    250
                     :||:|||.|..|||||||||||.||||||.|||||||||||||||||::|
RBAM_022440__    200 VYCLYEGAASKEAIDEVMKLGMRHPMGPLTLADFIGLDTCLSIMEVLYAG    249

BSNT_03596       251 LGDSKYRPCPLLRKYVKAGWLGKKSGRGFYDYEEKTS    287
                     |||.||||||||||||.|||||||||||||:|..   
RBAM_022440__    250 LGDPKYRPCPLLRKYVSAGWLGKKSGRGFYEYGR---    283


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