Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03596 and RBAM_022440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence dna-align/BSNT_03596.1.9828.seq
# -bsequence dna-align/RBAM_022440___mmgB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03596-RBAM_022440___mmgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03596-RBAM_022440___mmgB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03596
# 2: RBAM_022440___mmgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity: 595/933 (63.8%)
# Similarity: 595/933 (63.8%)
# Gaps: 150/933 (16.1%)
# Score: 1924.0
#
#
#=======================================
BSNT_03596 1 ATGGAAATCAAACAAATCATGGTAGCTGGCGCAGGTCAGATGGGAAGC-G 49
|||.|.||.|||..|||||||||.||.||.||.||||||||||| ||| |
RBAM_022440__ 1 ATGAAGATGAAAACAATCATGGTCGCAGGTGCGGGTCAGATGGG-AGCAG 49
BSNT_03596 50 GAATTGCTCAAACAGCTGCCGACGCAGGCTTTTATGTGCGGATGTATGA- 98
|.||.||.||.||.|||||.||.||.||.|||...||...|.|.||.||
RBAM_022440__ 50 GCATCGCGCAGACGGCTGCAGAAGCCGGGTTTGCCGTCAAGTTATACGAT 99
BSNT_03596 99 TGTGAATCCAGAGGCCGCGGAGGCAGGATTGAAACGG------------- 135
||.|| |||| |||||||
RBAM_022440__ 100 TGGGA--------GCCG-------------GAAACGGTAACAAAAGGTCT 128
BSNT_03596 136 -------CTGAAGAAACAGCTGGCCCGTGATGCTGAGAA-----AGGAAA 173
.|.||||.|.|.||| ||||| |||.||
RBAM_022440__ 129 TCACCGCATAAAGACAAACCTG------------GAGAAAGAGCAGGCAA 166
BSNT_03596 174 AAGGACCGA---GACGGAAGTGAAGAG--------CGTAATCAGCCGCAT 212
||||||.|| .||||.|| ||| |||..|||||||.||
RBAM_022440__ 167 AAGGACGGAAGTCACGGCAG----GAGACAGATGCCGTTTTCAGCCGTAT 212
BSNT_03596 213 TTC-------GATTTCTCAAACGCTTGAGGAGGCAGAGCATGCGGACATT 255
||| ||..||.|| ||.||.||..||||.||..||
RBAM_022440__ 213 TTCCCCGGCAGAACTCACA----------GAAGCGGAAGATGCTGATTTT 252
BSNT_03596 256 GTGATTGAGGCTATCGCAGAAAACATGGCGGCAAAAACTGAGATGTTTAA 305
.|.|||||.||.||.||||||||||.....||||||.|.||..|||||.|
RBAM_022440__ 253 ATAATTGAAGCCATTGCAGAAAACAAAAAAGCAAAAGCAGAATTGTTTGA 302
BSNT_03596 306 AACACTTGATCGCATTTGCCCGCCTCATACGATTTTGGCCAGCAATACAT 355
.|||||.|||...||.||.||.||||||.|..|.|||||.||||||||.|
RBAM_022440__ 303 CACACTAGATAAAATCTGTCCCCCTCATGCCGTATTGGCAAGCAATACGT 352
BSNT_03596 356 CTTC-CTTGCCTATTACAGAAATCGCTGCTGTAACAAACCGGCCTCAACG 404
|||| ||| ||.|||||.||..|.||.||.|..|||||..|||||.||..
RBAM_022440__ 353 CTTCTCTT-CCCATTACGGAGCTTGCCGCGGCCACAAAAAGGCCTGAAAA 401
BSNT_03596 405 GGTTATTGGCATGCATTTTATGAATCCCGTCCCTGTAATGAAGCTGGTTG 454
.||.||.||||||||||||||||||||.||.|||||.|||.||||.||.|
RBAM_022440__ 402 AGTAATCGGCATGCATTTTATGAATCCGGTTCCTGTCATGGAGCTTGTCG 451
BSNT_03596 455 AAGTGATTCGCGGCTTGGCTACATCAGAAGAAACGGCCTTAGATGTTATG 504
||||.||..|.||..|.||.|||||.||||||||||| |
RBAM_022440__ 452 AAGTCATCAGAGGACTCGCCACATCGGAAGAAACGGC------------G 489
BSNT_03596 505 G---CATTAGCGGAAAA-------------GATGGGGAAAACAGCGGTAG 538
| ||.|| ||.| ||||...|||||..|.||.|
RBAM_022440__ 490 GAAACAGTA----AAGAAGCTTGCCGTCCGGATGAATAAAACCCCTGTCG 535
BSNT_03596 539 AAGTCAATGATTTTCCTGGGTTTGTTTCCAACCGTGTGCTTCTT----CC 584
||||||||||.||.||.||.|||.|.||.||.| ||.|.|| ||
RBAM_022440__ 536 AAGTCAATGACTTCCCGGGCTTTATATCTAATC----GCATATTAATGCC 581
BSNT_03596 585 AATGATTAATGAAGCCATCTATTGCGTGTATGAGGGAGTGG---CGAAGC 631
.||||||||.||||||.|.||||||.|.|||||.||||..| |.||
RBAM_022440__ 582 GATGATTAACGAAGCCGTTTATTGCCTTTATGAAGGAGCAGCTTCAAA-- 629
BSNT_03596 632 CGGAGGCAATAGATGAAGTGATGAAGCTGGGCATGAATCATCCGATGGGT 681
|||.||.||.|||||.|||||||||||.||||||...||||||||||||
RBAM_022440__ 630 -GGAAGCGATTGATGAGGTGATGAAGCTCGGCATGCGGCATCCGATGGGT 678
BSNT_03596 682 CCGCTTGCATTAGCGGATTTTATCGGACTGGATACGTGTTTATCAATTAT 731
||..|..|||||||.||.||.|||||.|||||||||||..|.||.|||||
RBAM_022440__ 679 CCTTTAACATTAGCTGACTTCATCGGGCTGGATACGTGCCTTTCCATTAT 728
BSNT_03596 732 GGAAGTCCTTCACTCAGGCCTTGGCGATTCCAAATACCGTCCTTGCCCGC 781
|||.||.||..|..|.||.||.||.|||.|.||||||||.||.|||||.|
RBAM_022440__ 729 GGAGGTTCTCTATGCGGGGCTCGGAGATCCGAAATACCGCCCATGCCCTC 778
BSNT_03596 782 TGCTCCGCAAGTATGTCAAAGCAGGCTGGCTTGGCAAAAAGAGCGGACGC 831
|||||.|.||.|||||||..||.||||||||.||||||||.|||||.|||
RBAM_022440__ 779 TGCTCAGAAAATATGTCAGCGCCGGCTGGCTCGGCAAAAAAAGCGGGCGC 828
BSNT_03596 832 GGTTTTTATGACTATGAGGAGAAGACTTCCTGA 864
|||||||||||.||.| |.|||.||
RBAM_022440__ 829 GGTTTTTATGAGTACG-GCAGATGA-------- 852
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