Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03594 and RBAM_022420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_03594___mmgD.1.9828.seq
# -bsequence pep-align/RBAM_022420___mmgD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03594___mmgD-RBAM_022420___mmgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03594___mmgD-RBAM_022420___mmgD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03594___mmgD
# 2: RBAM_022420___mmgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 263/372 (70.7%)
# Similarity: 297/372 (79.8%)
# Gaps: 7/372 ( 1.9%)
# Score: 1365.0
#
#
#=======================================
BSNT_03594___ 1 MEEKQHYSPGLDGVIAAETHISYLDTQSSQILIRGYDLIELSETKSYLEL 50
.:.|||||||:||.||.||:||||...|||:|:||||||:|..|:::
RBAM_022420__ 1 ---MESYSPGLDGIIAVETGISFLDTQQGSILIKGHDLIELSKTAGYMDI 47
BSNT_03594___ 51 VHLLLEGRLPEESEMETLERKINSASSLPADHLRLLELLPKDTHPMDSLR 100
||||||.|||:..|...||..:.....||.:.|.:..|||:.|||||.||
RBAM_022420__ 48 VHLLLEDRLPDVKEKAALEEDVRRGGHLPEEILHICRLLPEHTHPMDGLR 97
BSNT_03594___ 101 TGLSALAGYDRQIDDRSPSANKERAYQLLGKMPALTAASYRIINKKEPIL 150
||||||.|:|:.|||||.|.|:.|...|:||||.||..|||:||..||:.
RBAM_022420__ 98 TGLSALGGFDKDIDDRSSSVNQHRVRGLIGKMPNLTVNSYRVINGLEPLA 147
BSNT_03594___ 151 PLQTLSYSANFLYMMTGKLPSSLEEQIFDRSLVLYSEHEMPNSTFAARVI 200
|:.|||||||||||:|||.||||||:||||||:||||||:|||||.||||
RBAM_022420__ 148 PVGTLSYSANFLYMITGKTPSSLEEEIFDRSLLLYSEHELPNSTFTARVI 197
BSNT_03594___ 201 ASTHSDLYGALTGAVASLKGNLHGGANEAVMYLLLEAKTTSDFEQLLQTK 250
|||.||:|||||||||||||||||||||||||:|.|||.|..|.|||..|
RBAM_022420__ 198 ASTQSDIYGALTGAVASLKGNLHGGANEAVMYMLEEAKDTDGFTQLLTQK 247
BSNT_03594___ 251 LKRKEKIMGFGHRVYMKKMDPRALMMKEALQQLCDKAGDHRLYEMCEAGE 300
|..|||||||||||||||||||||||||||:||.|.:||.|||.||||||
RBAM_022420__ 248 LANKEKIMGFGHRVYMKKMDPRALMMKEALKQLSDLSGDFRLYHMCEAGE 297
BSNT_03594___ 301 RLMEKEKGLYPNLDYYAAPVYWMLGIPIPLYTPIFFSARTSGLCAHVIEQ 350
.:|.::|||||||||||||||:||||||||||||||||||.|||||||||
RBAM_022420__ 298 TVMREKKGLYPNLDYYAAPVYYMLGIPIPLYTPIFFSARTVGLCAHVIEQ 347
BSNT_03594___ 351 HTNNRLFRPRVSYMGPRYQTKP 372
|:.||||||||.|.|.|.
RBAM_022420__ 348 HSRNRLFRPRVRYTGARL---- 365
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