Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03589 and RBAM_022390

See DNA alignment / Visit BSNT_03589 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:51
# Commandline: needle
#    -asequence pep-align/BSNT_03589___yqzF.1.9828.seq
#    -bsequence pep-align/RBAM_022390___yqzF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03589___yqzF-RBAM_022390___yqzF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03589___yqzF-RBAM_022390___yqzF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03589___yqzF
# 2: RBAM_022390___yqzF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 80
# Identity:      60/80 (75.0%)
# Similarity:    68/80 (85.0%)
# Gaps:           2/80 ( 2.5%)
# Score: 313.0
# 
#
#=======================================

BSNT_03589___      1 MSRLLALLILVIPGAISALGIKLMRDTLFGHTIKPFSALWLQGLSGFIFF     50
                     ||||:||||||:|||::|||||||||.||||...||.:|:|||.:|..||
RBAM_022390__      1 MSRLVALLILVLPGAVAALGIKLMRDALFGHAFSPFPSLFLQGAAGLAFF     50

BSNT_03589___     51 AIGLYVLAGFILYRDRKRNQVSPRFRKR--     78
                     ..|||||||||||||||||||||||||:  
RBAM_022390__     51 LFGLYVLAGFILYRDRKRNQVSPRFRKKKL     80


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