Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03589 and RBAM_022390

See Amino acid alignment / Visit BSNT_03589 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:51
# Commandline: needle
#    -asequence dna-align/BSNT_03589___yqzF.1.9828.seq
#    -bsequence dna-align/RBAM_022390___yqzF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03589___yqzF-RBAM_022390___yqzF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03589___yqzF-RBAM_022390___yqzF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03589___yqzF
# 2: RBAM_022390___yqzF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     178/245 (72.7%)
# Similarity:   178/245 (72.7%)
# Gaps:          10/245 ( 4.1%)
# Score: 641.0
# 
#
#=======================================

BSNT_03589___      1 ATGAGCCGACTTCTTGCGCTTTTAATATTAGTCATCCCCGGGGCTATTTC     50
                     ||||||||.|||.||||||||||.||..|.|||.|||||||.|||.|..|
RBAM_022390__      1 ATGAGCCGGCTTGTTGCGCTTTTGATTCTGGTCCTCCCCGGCGCTGTCGC     50

BSNT_03589___     51 TGCTTTAGGCATTAAACTGATGAGAGATACACTTTTCGGCCATACAATCA    100
                     .||..|.||||||||.||||||||||||.||.|.|||||.|||.|..|..
RBAM_022390__     51 GGCGCTCGGCATTAAGCTGATGAGAGATGCATTATTCGGGCATGCGTTTT    100

BSNT_03589___    101 AGCCATTTTCAGCTCTTTGGCTCCAAGGGTTGTCAGGATT--CATCTTTT    148
                     ..||.|||.|..|.||||..||.||.|||..|.|.|||||  |.|.||||
RBAM_022390__    101 CCCCGTTTCCGTCCCTTTTTCTTCAGGGGGCGGCCGGATTGGCGTTTTTT    150

BSNT_03589___    149 TTGCGATCGGCCTCTATGTGCTGGCCGGGTTCATTTTATACAGAGACAGA    198
                     ||  |.|||||||.|||||.||||||||.||.|||.|.||||||||..|.
RBAM_022390__    151 TT--GTTCGGCCTTTATGTTCTGGCCGGATTTATTCTGTACAGAGATCGG    198

BSNT_03589___    199 AAACGCAATCAAGTCAGCCCGCGATTCAGAAAACGATAG------    237
                     |||||||||||||||||||||||.|||||.|||..|.||      
RBAM_022390__    199 AAACGCAATCAAGTCAGCCCGCGGTTCAGGAAAAAAAAGCTGTAA    243


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