Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03585 and RBAM_022370
See
DNA alignment /
Visit
BSNT_03585 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence pep-align/BSNT_03585___ptb.1.9828.seq
# -bsequence pep-align/RBAM_022370___ptb.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03585___ptb-RBAM_022370___ptb.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03585___ptb-RBAM_022370___ptb.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03585___ptb
# 2: RBAM_022370___ptb
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity: 228/299 (76.3%)
# Similarity: 257/299 (86.0%)
# Gaps: 2/299 ( 0.7%)
# Score: 1121.0
#
#
#=======================================
BSNT_03585___ 1 MKLKDLIGKASMHKNKTIAVAHAEDEEVIRAVKLAAEHLSARFLLTGDST 50
|||:||:.||:....||||||||.|:|||:|||:|||||||||||||||.
RBAM_022370__ 1 MKLRDLVEKAAAKNAKTIAVAHAADKEVIQAVKMAAEHLSARFLLTGDSG 50
BSNT_03585___ 51 KLNELTSSMQGHQVEIVHADTPEESAKLAVRAVHHKTADVLMKGNVPTSV 100
||.||.::......||:|||:|||||..|||||..:.||||||||:|:|.
RBAM_022370__ 51 KLKELLANEPKFNAEIIHADSPEESAAKAVRAVREQEADVLMKGNLPSST 100
BSNT_03585___ 101 LLKAVLNRQEGLRSSSVLSHVAVFDIPDFDRLMFVTDSAMNIAPSLEELR 150
|||:||||.|||||..||||||||::||:||||:|||||:|||||||||.
RBAM_022370__ 101 LLKSVLNRHEGLRSKMVLSHVAVFEVPDYDRLMYVTDSALNIAPSLEELG 150
BSNT_03585___ 151 QILQNAVHVAHAVGNNMPKAAALAAVETVNPKMEATVNAAALAQMYKRGQ 200
.||||||||||:|||.|||||.|||:||||||||||:||||:.||..|||
RBAM_022370__ 151 HILQNAVHVAHSVGNPMPKAAVLAAIETVNPKMEATLNAAAIVQMCNRGQ 200
BSNT_03585___ 201 IKGCIVDGPLALDNAVSQIAAAQKKISGDVAGNADILLVPTIEAGNILYK 250
|.|||.||||||||||||.||.||.|||.|||.|||||||:|||||:|||
RBAM_022370__ 201 ITGCIADGPLALDNAVSQAAALQKGISGSVAGQADILLVPSIEAGNMLYK 250
BSNT_03585___ 251 SLIYFAKASVAAVITGAKAPIALTSRADSAENKLYSIALAICASEEYTH 299
|:||||||:|||||.|||||||||||||:|||||||||||||||:|.
RBAM_022370__ 251 SMIYFAKANVAAVIAGAKAPIALTSRADTAENKLYSIALAICASQEQ-- 297
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.