Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03585 and RBAM_022370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_03585___ptb.1.9828.seq
# -bsequence dna-align/RBAM_022370___ptb.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03585___ptb-RBAM_022370___ptb.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03585___ptb-RBAM_022370___ptb.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03585___ptb
# 2: RBAM_022370___ptb
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 927
# Identity: 667/927 (72.0%)
# Similarity: 667/927 (72.0%)
# Gaps: 60/927 ( 6.5%)
# Score: 2324.5
#
#
#=======================================
BSNT_03585___ 1 ATGAAGCTGAAAGATTTAATCGGCAAAGCGTCGATGCACAAAAA---TAA 47
||||||||||.|||..||.|.|..||||| ||..||| ||||| .||
RBAM_022370__ 1 ATGAAGCTGAGAGACCTAGTTGAAAAAGC--CGCGGCA-AAAAACGCAAA 47
BSNT_03585___ 48 GACCATTGCGGTTGCTCATGCTGAGGATGAGGAAGTGATCCGGGCTGTAA 97
.||||||||.||.||.||.||.|..|||.|.||||||||||.|||.||.|
RBAM_022370__ 48 AACCATTGCAGTGGCCCACGCAGCAGATAAAGAAGTGATCCAGGCCGTCA 97
BSNT_03585___ 98 AGCTGGCTGCCGAGCACCTATCCGCCCGTTTCTTGTTAACGGGCGACAGC 147
|..||||.||.||.|||.|.||.||.||.||.||..|.|||||.||||||
RBAM_022370__ 98 AAATGGCGGCAGAACACTTGTCGGCACGATTTTTACTGACGGGTGACAGC 147
BSNT_03585___ 148 ACAAAACTGAACGAGCT-----GACATCATCCATGCAAGGGCATCAAGTG 192
..|||.|||||.||||| .|.||.|.|| .||| .|||| ||
RBAM_022370__ 148 GGAAAGCTGAAAGAGCTTCTGGCAAATGAGCC---GAAG---TTCAA-TG 190
BSNT_03585___ 193 --GAAATCGTCCATGCCGATACTCCTGAGGAAT---CGGCAAAATTAGCG 237
||||||.||||.||||||.|.||.||.|||| ||||||| |||.
RBAM_022370__ 191 CTGAAATCATCCACGCCGATTCACCCGAAGAATCTGCGGCAAA---AGCA 237
BSNT_03585___ 238 GTTCGTGCTGTGCATCATAAAACA-GCGGACGTTTTAATGAAAGGCAATG 286
||.||.||.||||.|.| |.||.| ||||||||||||||||||||.|||.
RBAM_022370__ 238 GTGCGCGCAGTGCGTGA-ACAAGAGGCGGACGTTTTAATGAAAGGGAATC 286
BSNT_03585___ 287 TGCCGA--------CTTCTGTTTTGCTTAAAGCGGTATTGAACAGACAGG 328
|.|||| |||||| |||.||||.||.|||.|.||.|
RBAM_022370__ 287 TCCCGAGCTCAACTCTTCTG--------AAATCGGTTTTAAACCGCCATG 328
BSNT_03585___ 329 AGGGGCTTCGGTCATCAA--GTGTCCTTTCCCACGTGGCTGTCTTTGATA 376
|.||||||||.|||..|| |||| |.||.||.||.||.||.|||||..
RBAM_022370__ 329 AAGGGCTTCGTTCAAAAATGGTGT--TATCACATGTAGCCGTTTTTGAGG 376
BSNT_03585___ 377 TACCGGATTTTGACCGGCTGATGTTTGTGACAGATTCGGCAATGAATATT 426
|.|||||.|.||||||||||||||.||||||.|||||.||..||||.|||
RBAM_022370__ 377 TGCCGGACTATGACCGGCTGATGTATGTGACTGATTCAGCGCTGAACATT 426
BSNT_03585___ 427 GCTCCTTCGCTGGAAGAGCTTCGGCAGATTTTGCAAAATGCCGTTCATGT 476
||.||.||.||.||||||||..||||.|||.||||||||||.|||||.||
RBAM_022370__ 427 GCCCCGTCTCTTGAAGAGCTCGGGCATATTCTGCAAAATGCGGTTCACGT 476
BSNT_03585___ 477 GGCCCATGCAGTGGGGAACAATATGCCAAAAGCAGCTGCTCTGGCAGCGG 526
.||.|||.||||.||||||..||||||.|||||.||.|..||.||.||..
RBAM_022370__ 477 TGCACATTCAGTAGGGAACCCTATGCCGAAAGCCGCAGTCCTTGCCGCTA 526
BSNT_03585___ 527 TCGAAACGGTGAACCCTAAAATGGAAGCGACCGTGAATGCAGCTGCTCTA 576
|.||||||||.||.||.||||||||.||||||.||||.||.|||||..|.
RBAM_022370__ 527 TTGAAACGGTTAATCCGAAAATGGAGGCGACCCTGAACGCGGCTGCGATC 576
BSNT_03585___ 577 GCTCAAATGTACAAAAGGGGCCAGATCAAAGGCTGCATTGTTGATGGACC 626
|..||.||||.|||.||.||.|||||.|..||||||||||..||.|||||
RBAM_022370__ 577 GTCCAGATGTGCAATAGAGGACAGATTACCGGCTGCATTGCGGACGGACC 626
BSNT_03585___ 627 ACTTGCTTTGGATAACGCAGTTTCACAAATTGCCGCGGCCCAGAAAAAA- 675
.||||||||||||||.||.||.||.||| ||.||.||.|.|.|||||
RBAM_022370__ 627 GCTTGCTTTGGATAATGCCGTATCCCAA---GCGGCTGCGCTGCAAAAAG 673
BSNT_03585___ 676 --ATTTCGGGAGACGTAGCGGGCAACGCAGATATCCTTCTCGTCCCAACA 723
|||||.|||..||||||||||.|.||.|||||.||..|.||.||..||
RBAM_022370__ 674 GGATTTCCGGAAGCGTAGCGGGCCAGGCGGATATTCTCTTGGTTCCTTCA 723
BSNT_03585___ 724 ATTGAGGCCGGCAATATTTTATATAAATCTCTGATTTATTTTGCCAAGGC 773
||.||||||||.|||||..|.|||||.||..|||||||||||||.||.||
RBAM_022370__ 724 ATCGAGGCCGGAAATATGCTTTATAAGTCAATGATTTATTTTGCGAAAGC 773
BSNT_03585___ 774 CAGCGTGGCGGCTGTCATTACAGGAGCCAAAGCACCGATTGCCTTAACAA 823
.|..||.||.||.|||||..|.||.||.|||||.|||||.||.|||||.|
RBAM_022370__ 774 AAATGTTGCTGCCGTCATCGCCGGTGCAAAAGCGCCGATCGCATTAACGA 823
BSNT_03585___ 824 GCAGAGCGGACTCTGCTGAAAATAAACTGTATTCCATTGCGCTGGCAATA 873
||||||||||..|.||.|||||||||||||||||.||||||||.||.||.
RBAM_022370__ 824 GCAGAGCGGATACCGCAGAAAATAAACTGTATTCAATTGCGCTTGCGATT 873
BSNT_03585___ 874 TGCGCATCTGAAGAATACACACATTAG 900
||||||||..|||| |||.|||
RBAM_022370__ 874 TGCGCATCACAAGA------ACAGTAG 894
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