Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03582 and RBAM_022340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence pep-align/BSNT_03582___lpdV.1.9828.seq
# -bsequence pep-align/RBAM_022340___lpdV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03582___lpdV-RBAM_022340___lpdV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03582___lpdV-RBAM_022340___lpdV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03582___lpdV
# 2: RBAM_022340___lpdV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 395/474 (83.3%)
# Similarity: 431/474 (90.9%)
# Gaps: 1/474 ( 0.2%)
# Score: 2030.0
#
#
#=======================================
BSNT_03582___ 1 MATEYDVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPS 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_022340__ 1 MATEYDVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPS 50
BSNT_03582___ 51 KALLRSAEVYRTAREADQFGVETAGVSLNFEKVQQRKQAVVDKLAAGVNH 100
|||||||||||||:||..||:||.||||.|:.||:|||.:||:||.||.|
RBAM_022340__ 51 KALLRSAEVYRTAKEAAAFGIETEGVSLRFDSVQKRKQGIVDRLAGGVAH 100
BSNT_03582___ 101 LMKKGKIDVYTGYGRILGPSIFSPLPGTISVERGNGEENDMLIPKQVIIA 150
|||||||||:.||||:||||||||||||:|||..||||||||||||:|||
RBAM_022340__ 101 LMKKGKIDVFNGYGRMLGPSIFSPLPGTVSVEYANGEENDMLIPKQLIIA 150
BSNT_03582___ 151 TGSRPRMLPGLEADGKSVLTSDEALQMEELPQSIIIVGGGVIGIEWASML 200
|||||:|||||||||..:|||||||::|.||||::|||||||||||||||
RBAM_022340__ 151 TGSRPKMLPGLEADGTYILTSDEALELERLPQSMMIVGGGVIGIEWASML 200
BSNT_03582___ 201 HDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFITGAKVLPDTM 250
:||||.:||||||||||||||.:||.|||.||.||||:.:|||||||||:
RBAM_022340__ 201 NDFGVNITVIEYADRILPTEDRDISSEMEKLLTKKGIKIVTGAKVLPDTL 250
BSNT_03582___ 251 TKTSDDISIQAEKDGETVTYSAEKMLVSIGRQANIEGIGLENTDIVTENG 300
.| :|.:||.|||:|:..||.||:||||||||.||||||||||||..|||
RBAM_022340__ 251 EK-ADGVSIAAEKNGKKETYHAEQMLVSIGRQPNIEGIGLENTDIEAENG 299
BSNT_03582___ 301 MISVNESCQTKESHIYAIGDVIGGLQLAHVASHEGIIAVEHFAGLNPHPL 350
.|.|||:.|||||||||||||:||||||||||.||||||||.|||||.||
RBAM_022340__ 300 SIIVNEAGQTKESHIYAIGDVVGGLQLAHVASREGIIAVEHMAGLNPAPL 349
BSNT_03582___ 351 DPTLVPKCIYSSPEAASVGLTEDEAKANGHNVKIGKFPFMAIGKALVYGE 400
|..||||||||:||||||||||:||...||.:|||||||||||||||||:
RBAM_022340__ 350 DAALVPKCIYSNPEAASVGLTEEEALRKGHELKIGKFPFMAIGKALVYGD 399
BSNT_03582___ 401 SDGFVKIVADRDTDDILGVHMIGPHVTDMISEAGLAKVLDATPWEIGQTI 450
|||||||||||:||||||||||||||||||||||||||||||||||||:|
RBAM_022340__ 400 SDGFVKIVADRNTDDILGVHMIGPHVTDMISEAGLAKVLDATPWEIGQSI 449
BSNT_03582___ 451 HPHPTLSEAIGEAALAADGKAIHF 474
||||:||||||||||||||.||||
RBAM_022340__ 450 HPHPSLSEAIGEAALAADGNAIHF 473
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