Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03580 and RBAM_022330

See DNA alignment / Visit BSNT_03580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_03580___bkdAA.1.9828.seq
#    -bsequence pep-align/RBAM_022330___bkdAA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03580___bkdAA-RBAM_022330___bkdAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03580___bkdAA-RBAM_022330___bkdAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03580___bkdAA
# 2: RBAM_022330___bkdAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     293/330 (88.8%)
# Similarity:   316/330 (95.8%)
# Gaps:           0/330 ( 0.0%)
# Score: 1542.0
# 
#
#=======================================

BSNT_03580___      1 MSTNRHQALGLTDQEAVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQG     50
                     |:|||||||||:|:|||:|||||||||||||||||||||||||||:||||
RBAM_022330__      1 MTTNRHQALGLSDEEAVEMYRTMLLARKIDERMWLLNRSGKIPFVVSCQG     50

BSNT_03580___     51 QEAAQVGAAFALDREMDYVLPYYRDMGVVLAFGMTAKDLMMSGFAKAADP    100
                     |||||||||:||:|:.|||||||||:||||||||||||||||||||||||
RBAM_022330__     51 QEAAQVGAAYALNRDTDYVLPYYRDIGVVLAFGMTAKDLMMSGFAKAADP    100

BSNT_03580___    101 NSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIALAGRMEKKDIAAFV    150
                     |||||||||||||||||||||||||||||||||||||||||:||||.:||
RBAM_022330__    101 NSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGIALAGRMDKKDIVSFV    150

BSNT_03580___    151 TFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDKQVACENI    200
                     |||||||||||||||||||||:||||||||||||||||||||:|||||.|
RBAM_022330__    151 TFGEGSSNQGDFHEGANFAAVYKLPVIFMCENNKYAISVPYDRQVACEKI    200

BSNT_03580___    201 SDRAVGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLT    250
                     ||||.|||||||||:|||.||||:|||||||||.:|||||||||:|||||
RBAM_022330__    201 SDRAAGYGMPGVTVDGNDLLEVYRAVKEARERASKGEGPTLIETVSYRLT    250

BSNT_03580___    251 PHSSDDDDSSYRGREEVEEAKKSDPLLTYQAYLKETGLLSDEMEQTMLDE    300
                     ||||||||||||.|||||||||.||||.|:|||||.|||.:|.|:||||:
RBAM_022330__    251 PHSSDDDDSSYREREEVEEAKKQDPLLLYKAYLKEAGLLGEEEEKTMLDD    300

BSNT_03580___    301 IMAIVNEATDEAENAPYAAPESALDYVYAK    330
                     |||||||||||||.||||:|||.||:||||
RBAM_022330__    301 IMAIVNEATDEAEKAPYASPESTLDHVYAK    330


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