Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03573 and RBAM_022300

See DNA alignment / Visit BSNT_03573 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence pep-align/BSNT_03573___bmrU.1.9828.seq
#    -bsequence pep-align/RBAM_022300___bmrU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03573___bmrU-RBAM_022300___bmrU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03573___bmrU-RBAM_022300___bmrU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03573___bmrU
# 2: RBAM_022300___bmrU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     202/298 (67.8%)
# Similarity:   241/298 (80.9%)
# Gaps:           1/298 ( 0.3%)
# Score: 1062.0
# 
#
#=======================================

BSNT_03573___      1 MSHRKALLIHNGNAGNKNIEKALGAVVPVLSHHLDEVIIKQTKKKDDAYH     50
                     ||.|||:||:|||||.|.|:|.||.|||:|:...||::||.||.:|||..
RBAM_022300__      1 MSQRKAVLIYNGNAGQKQIDKTLGTVVPILAQSADELLIKPTKHQDDARQ     50

BSNT_03573___     51 FCRSIDDSVDTVFILGGDGTIHQCINAISALERKPAVGILPGGTCNDFSR    100
                     :|.::|.|||.::|||||||:|||||:||.|:.:||||||||||||||||
RBAM_022300__     51 YCENLDSSVDHLYILGGDGTVHQCINSISKLDHRPAVGILPGGTCNDFSR    100

BSNT_03573___    101 VLGIPQNLAKAAEALMAGNKTSVDVCQMNDRYFLNFWGIGLIAETSNQIN    150
                     .|||||||.||||||.||:|..:|||:.:|.|||||||||||.|.|:.||
RBAM_022300__    101 ALGIPQNLQKAAEALAAGHKRMIDVCKTDDGYFLNFWGIGLITEASSHIN    150

BSNT_03573___    151 ETEKALLGKISYFTSALRTVSSAASFPMTLKIDGKEIKEEAVMLLVMNGQ    200
                     |||||.|||||||||||||::||..||:.|.|||:..::||||:|||||.
RBAM_022300__    151 ETEKAWLGKISYFTSALRTMTSANPFPVKLTIDGEVKEDEAVMVLVMNGH    200

BSNT_03573___    201 YIGTNRIPLPDASIEDGLLDVLICRNTNLTALRELMSMEQGSIDRFTGEL    250
                     ||||||:||||||::|||.||||||||:|.||||||:|||||.|.|.|||
RBAM_022300__    201 YIGTNRVPLPDASLQDGLADVLICRNTSLAALRELMTMEQGSFDDFKGEL    250

BSNT_03573___    251 SYVQASRIEIETDTAKKADMDGEVYTHTPAVIQVLPQHIDMLVPANG-    297
                     ||:|||||||||.....||.|||||..||..|:|...|:.|:||.:. 
RBAM_022300__    251 SYIQASRIEIETGREMDADTDGEVYGTTPCTIEVKKHHLTMIVPEDSQ    298


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