Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03565 and RBAM_022260

See DNA alignment / Visit BSNT_03565 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence pep-align/BSNT_03565___yqiZ.1.9828.seq
#    -bsequence pep-align/RBAM_022260___yqiZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03565___yqiZ-RBAM_022260___yqiZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03565___yqiZ-RBAM_022260___yqiZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03565___yqiZ
# 2: RBAM_022260___yqiZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     210/240 (87.5%)
# Similarity:   221/240 (92.1%)
# Gaps:           0/240 ( 0.0%)
# Score: 1060.0
# 
#
#=======================================

BSNT_03565___      1 MIKVEKLSKSFGKHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLL     50
                     ||||:.||||||||||||||||.|.|||||||||||||||||||||||||
RBAM_022260__      1 MIKVDNLSKSFGKHEVLKNISTQIEEGEVVAVIGPSGSGKSTFLRCLNLL     50

BSNT_03565___     51 EKPNGGTITIKDTEITKPKTNTLKVRENIGMVFQHFHLFPHKTVLENIMY    100
                     |.|:||||.||:.|||..|||.||||||||||||||||||||||||||.|
RBAM_022260__     51 ETPSGGTIAIKENEITAAKTNKLKVRENIGMVFQHFHLFPHKTVLENITY    100

BSNT_03565___    101 APVNVKKESKQAAKEKAEDLLRKVGLFEKRNDYPNRLSGGQKQRVAIARA    150
                     |||:||||||..|:|||..||.||||.:||||||||||||||||||||||
RBAM_022260__    101 APVSVKKESKNEAEEKACALLEKVGLLDKRNDYPNRLSGGQKQRVAIARA    150

BSNT_03565___    151 LAMNPDIMLFDEPTSALDPEMVKEVLQVMKELVETGMTMVIVTHEMGFAK    200
                     ||||||||||||||||||||||||||:|||||.:||||||||||||||||
RBAM_022260__    151 LAMNPDIMLFDEPTSALDPEMVKEVLEVMKELAQTGMTMVIVTHEMGFAK    200

BSNT_03565___    201 EVADRVLFMDQGMIVEDGNPKEFFMSPKSKRAQDFLEKIL    240
                     ||||||||||:|.|||||.|:|||:|||||||||||||||
RBAM_022260__    201 EVADRVLFMDEGTIVEDGQPEEFFLSPKSKRAQDFLEKIL    240


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