Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03564 and RBAM_022250

See DNA alignment / Visit BSNT_03564 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence pep-align/BSNT_03564___yqjA.1.9828.seq
#    -bsequence pep-align/RBAM_022250___yqjA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03564___yqjA-RBAM_022250___yqjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03564___yqjA-RBAM_022250___yqjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03564___yqjA
# 2: RBAM_022250___yqjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     286/322 (88.8%)
# Similarity:   306/322 (95.0%)
# Gaps:           5/322 ( 1.6%)
# Score: 1480.0
# 
#
#=======================================

BSNT_03564___      1 MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQ     50
                     ||||||||:|||||||||||::||||||||||||||||||||||||||||
RBAM_022250__      1 MFKIGYRTLKTALGTALAIYLAQLLHLQNFASAGIITILCIQITQKRSLQ     50

BSNT_03564___     51 ASWARFAACCLAIVFSYLFFELIGYHPFVIGALLLIFIPITVLLKINEGI    100
                     |||||||||.|||||||:||.||||:||.||.||::|||.||:|||||||
RBAM_022250__     51 ASWARFAACLLAIVFSYVFFGLIGYYPFAIGILLVLFIPTTVVLKINEGI    100

BSNT_03564___    101 VTSSVIILHLYMSGGITLAFIWNEVQLITVGIGVALLMNLYMPSLDRKLI    150
                     |||||||||||||||||:||||||.||||||||||||||||||||||||.
RBAM_022250__    101 VTSSVIILHLYMSGGITMAFIWNEFQLITVGIGVALLMNLYMPSLDRKLA    150

BSNT_03564___    151 AYRKKIEDNFAVIFAEIERYLLTGEQDWSGKEIPETHQLITEAKNLAYRD    200
                     ||||||||||:|||||||||||||||||||||||||||:|.|||||||||
RBAM_022250__    151 AYRKKIEDNFSVIFAEIERYLLTGEQDWSGKEIPETHQMIQEAKNLAYRD    200

BSNT_03564___    201 VQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITVDQGKMIAEFI    250
                     |||||||:|||:|||||||:||||||||||||:|||||||:|||:||.||
RBAM_022250__    201 VQNHILRHENLYYHYFKMRQKQFEIIERLLPKITSISITVEQGKIIAHFI    250

BSNT_03564___    251 HDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLG    300
                     |:|||||||||||:|||||||:||.|||||||||||||||||||||||||
RBAM_022250__    251 HELREAIHPGNTAHKFLKRLAEMRTEFEEMPLPATREEFEARAALFHLLG    300

BSNT_03564___    301 EMEQYLVIKSYFKGIKAQKSLG    322
                     ||||||||||||||||.     
RBAM_022250__    301 EMEQYLVIKSYFKGIKL-----    317


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