Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03561 and RBAM_022230

See DNA alignment / Visit BSNT_03561 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence pep-align/BSNT_03561___yqjC.1.9828.seq
#    -bsequence pep-align/RBAM_022230___yqjC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03561___yqjC-RBAM_022230___yqjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03561___yqjC-RBAM_022230___yqjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03561___yqjC
# 2: RBAM_022230___yqjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:      78/142 (54.9%)
# Similarity:   100/142 (70.4%)
# Gaps:           2/142 ( 1.4%)
# Score: 394.5
# 
#
#=======================================

BSNT_03561___      1 MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSV     50
                     |.:|||:||||.||:.||.|||.:|||.::..|.|..|.|.|||.:||..
RBAM_022230__      1 MKKLDHVGIAVSSIEAARGFYERMLGLTYMGDELVSGQNVRVAFLEAGGT     50

BSNT_03561___     51 KLELIEPLTADSPVRLFLEKKGQGLHHIAFLCNGLSEQLQALSDRHVQLI    100
                     ||||||||:..|||..||:.:|:||||:||.|..:.|.::.|....:.||
RBAM_022230__     51 KLELIEPLSDASPVSSFLQIRGEGLHHLAFRCADMKETIKELEACRMTLI    100

BSNT_03561___    101 DRFPRQGANGKKIAFISPRETNGVLVELCE--PKGDQQNEHE    140
                     ...|:.||.||||||:||:|.||||:||||  .||:.|:|||
RBAM_022230__    101 HHEPQNGAGGKKIAFLSPKEANGVLIELCETIEKGETQDEHE    142


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