Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03558 and RBAM_022220

See DNA alignment / Visit BSNT_03558 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence pep-align/BSNT_03558.1.9828.seq
#    -bsequence pep-align/RBAM_022220___yqjD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03558-RBAM_022220___yqjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03558-RBAM_022220___yqjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03558
# 2: RBAM_022220___yqjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity:     297/508 (58.5%)
# Similarity:   334/508 (65.7%)
# Gaps:         135/508 (26.6%)
# Score: 1561.0
# 
#
#=======================================

BSNT_03558         0 --------------------------------------------------      0
                                                                       
RBAM_022220__      1 MSMSDHIRHLNERRSFLTNGGGAEKNEKQHKKGKLTARERIDYLLDEDSF     50

BSNT_03558         0 --------------------------------------------------      0
                                                                       
RBAM_022220__     51 SELQPFAKSCMPGCQNAPGDGVVTGYGTIDGRPVYLFAHDFTVLGGTLGE    100

BSNT_03558         1 ----------------------------------MVSLDGYGHIFYRNVL     16
                                                       :|||:||||||.||||
RBAM_022220__    101 THAEKIAAVMDLAAKNKTPIIGLNDSGGARIQEGVVSLNGYGHIFRRNVL    150

BSNT_03558        17 YSGVIPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVT     66
                     ||||||||||||||||||||||||||||:.|||.|..||||||||||:||
RBAM_022220__    151 YSGVIPQISVILGPCAGGAVYSPALTDFVIMAEHTSHMFITGPKVIEQVT    200

BSNT_03558        67 GEQVDAESLGGAGIHNAVSGNAHFSGHTEKEVLTGVRKLLSYLPLNGRTT    116
                     |||:||||||||||||.:|||||:|..||||.|:.|:.||||||..|:|.
RBAM_022220__    201 GEQIDAESLGGAGIHNVISGNAHYSARTEKEALSAVKTLLSYLPHGGQTA    250

BSNT_03558       117 EPKPEKEASRPLLNRLVPADTTKPYDVRKVIRELADPQTFFELQPFFAKN    166
                     .| .:||.:|||||.|||||::|||||.:||:||||..|||::||:||||
RBAM_022220__    251 SP-VKKEDARPLLNTLVPADSSKPYDVLQVIKELADDGTFFDIQPYFAKN    299

BSNT_03558       167 IVIGFARLGEKAIGIVASQPKHLAGSLTIDAADKAARFIRFCDAFDIPLL    216
                     |.:||.:||.:.:|:||:|||||||||||||||||:|||||||||.||||
RBAM_022220__    300 IAVGFLKLGRRTVGVVANQPKHLAGSLTIDAADKASRFIRFCDAFHIPLL    349

BSNT_03558       217 TVEDVPGFLPGIQQEHNGIIRHGAKLLFAYAEATVPKVTLIIRKAYGGAY    266
                     |:.||||||||.||||.||||||||||:|:||||||||||||||||||||
RBAM_022220__    350 TIADVPGFLPGFQQEHAGIIRHGAKLLYAFAEATVPKVTLIIRKAYGGAY    399

BSNT_03558       267 VAMNSKAIGADLVFAWPNAEIAVMGPEGAASILYEKEIKASADPQKTKRE    316
                     ||||||.:|||||||||||||||||.||||||||.::|:||.||:|||||
RBAM_022220__    400 VAMNSKGLGADLVFAWPNAEIAVMGAEGAASILYSRDIQASDDPEKTKRE    449

BSNT_03558       317 KTAEYKKQNAGPYKAAACGMVDDIILPEESRGKLIQAFHMLAHKTEERPK    366
                     |.|.|:|:|||||||||||||||||.||:||.||||||.|||||.|||||
RBAM_022220__    450 KKAIYEKENAGPYKAAACGMVDDIIRPEDSRKKLIQAFDMLAHKEEERPK    499

BSNT_03558       367 KKHGNIPL    374
                     ||||||||
RBAM_022220__    500 KKHGNIPL    507


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