Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03558 and RBAM_022220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence pep-align/BSNT_03558.1.9828.seq
# -bsequence pep-align/RBAM_022220___yqjD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03558-RBAM_022220___yqjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03558-RBAM_022220___yqjD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03558
# 2: RBAM_022220___yqjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity: 297/508 (58.5%)
# Similarity: 334/508 (65.7%)
# Gaps: 135/508 (26.6%)
# Score: 1561.0
#
#
#=======================================
BSNT_03558 0 -------------------------------------------------- 0
RBAM_022220__ 1 MSMSDHIRHLNERRSFLTNGGGAEKNEKQHKKGKLTARERIDYLLDEDSF 50
BSNT_03558 0 -------------------------------------------------- 0
RBAM_022220__ 51 SELQPFAKSCMPGCQNAPGDGVVTGYGTIDGRPVYLFAHDFTVLGGTLGE 100
BSNT_03558 1 ----------------------------------MVSLDGYGHIFYRNVL 16
:|||:||||||.||||
RBAM_022220__ 101 THAEKIAAVMDLAAKNKTPIIGLNDSGGARIQEGVVSLNGYGHIFRRNVL 150
BSNT_03558 17 YSGVIPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVT 66
||||||||||||||||||||||||||||:.|||.|..||||||||||:||
RBAM_022220__ 151 YSGVIPQISVILGPCAGGAVYSPALTDFVIMAEHTSHMFITGPKVIEQVT 200
BSNT_03558 67 GEQVDAESLGGAGIHNAVSGNAHFSGHTEKEVLTGVRKLLSYLPLNGRTT 116
|||:||||||||||||.:|||||:|..||||.|:.|:.||||||..|:|.
RBAM_022220__ 201 GEQIDAESLGGAGIHNVISGNAHYSARTEKEALSAVKTLLSYLPHGGQTA 250
BSNT_03558 117 EPKPEKEASRPLLNRLVPADTTKPYDVRKVIRELADPQTFFELQPFFAKN 166
.| .:||.:|||||.|||||::|||||.:||:||||..|||::||:||||
RBAM_022220__ 251 SP-VKKEDARPLLNTLVPADSSKPYDVLQVIKELADDGTFFDIQPYFAKN 299
BSNT_03558 167 IVIGFARLGEKAIGIVASQPKHLAGSLTIDAADKAARFIRFCDAFDIPLL 216
|.:||.:||.:.:|:||:|||||||||||||||||:|||||||||.||||
RBAM_022220__ 300 IAVGFLKLGRRTVGVVANQPKHLAGSLTIDAADKASRFIRFCDAFHIPLL 349
BSNT_03558 217 TVEDVPGFLPGIQQEHNGIIRHGAKLLFAYAEATVPKVTLIIRKAYGGAY 266
|:.||||||||.||||.||||||||||:|:||||||||||||||||||||
RBAM_022220__ 350 TIADVPGFLPGFQQEHAGIIRHGAKLLYAFAEATVPKVTLIIRKAYGGAY 399
BSNT_03558 267 VAMNSKAIGADLVFAWPNAEIAVMGPEGAASILYEKEIKASADPQKTKRE 316
||||||.:|||||||||||||||||.||||||||.::|:||.||:|||||
RBAM_022220__ 400 VAMNSKGLGADLVFAWPNAEIAVMGAEGAASILYSRDIQASDDPEKTKRE 449
BSNT_03558 317 KTAEYKKQNAGPYKAAACGMVDDIILPEESRGKLIQAFHMLAHKTEERPK 366
|.|.|:|:|||||||||||||||||.||:||.||||||.|||||.|||||
RBAM_022220__ 450 KKAIYEKENAGPYKAAACGMVDDIIRPEDSRKKLIQAFDMLAHKEEERPK 499
BSNT_03558 367 KKHGNIPL 374
||||||||
RBAM_022220__ 500 KKHGNIPL 507
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