Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03545 and RBAM_022130

See DNA alignment / Visit BSNT_03545 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence pep-align/BSNT_03545___yqjL.1.9828.seq
#    -bsequence pep-align/RBAM_022130___yqjL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03545___yqjL-RBAM_022130___yqjL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03545___yqjL-RBAM_022130___yqjL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03545___yqjL
# 2: RBAM_022130___yqjL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     170/257 (66.1%)
# Similarity:   206/257 (80.2%)
# Gaps:           4/257 ( 1.6%)
# Score: 903.5
# 
#
#=======================================

BSNT_03545___      1 MKSAWMEKTYTIDGCAFHTQHRKGSSGVTIVFEAGYGTSSETWKPLMADI     50
                     ||:||||:||.||||.|:|:||||:..||||||||||||||||..|:|||
RBAM_022130__      1 MKAAWMERTYLIDGCPFYTKHRKGAGEVTIVFEAGYGTSSETWTSLLADI     50

BSNT_03545___     51 DDEFGIFTYDRAGIGKSGQSRAKRTADQQVKELESLLKAADVKPPYLAVS    100
                     |:|||:|||||||||||||||.|||||..|:||.:||..|.||||||.||
RBAM_022130__     51 DEEFGVFTYDRAGIGKSGQSRNKRTADHMVQELNALLLKAGVKPPYLVVS    100

BSNT_03545___    101 HSYGAVITGLWACKNKYDIIGMVLLDPALGDCAS--FTFIPEEMHRSHTR    148
                     |||||:|:.|||.:|:.||:|||:|||...|..:  ...:||||..::.:
RBAM_022130__    101 HSYGAIISRLWASRNRRDILGMVMLDPVSEDQETKVLPLLPEEMKAAYLK    150

BSNT_03545___    149 KMMLEGTHAEFSKSLQELKKRQVHLGNMPLLVLSSGERTEKFA-AEQEWQ    197
                     :.:|||:||||..||:::|.:|:|.|:||||:||||||.|:.. |.::|.
RBAM_022130__    151 QFILEGSHAEFLTSLRQIKHQQIHFGDMPLLILSSGERDERLKHAHEQWV    200

BSNT_03545___    198 NLHSSILSLSNQSGWIQAKNSSHNIHHDEPHIVHLAIYDVWCAACQQA-A    246
                     .||.|:|.:|.||||||||||||.|||||||||||||||||||..||. |
RBAM_022130__    201 KLHRSMLDVSYQSGWIQAKNSSHAIHHDEPHIVHLAIYDVWCAVRQQMNA    250

BSNT_03545___    247 PLYQAVN    253
                     |.|||||
RBAM_022130__    251 PAYQAVN    257


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