Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03541 and RBAM_022120

See DNA alignment / Visit BSNT_03541 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence pep-align/BSNT_03541___namA.1.9828.seq
#    -bsequence pep-align/RBAM_022120___yqjM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03541___namA-RBAM_022120___yqjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03541___namA-RBAM_022120___yqjM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03541___namA
# 2: RBAM_022120___yqjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity:     295/338 (87.3%)
# Similarity:   321/338 (95.0%)
# Gaps:           0/338 ( 0.0%)
# Score: 1569.0
# 
#
#=======================================

BSNT_03541___      1 MARKLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAI     50
                     ||||||||.|:||:|:||||||:||||||||||||||.||||||||||||
RBAM_022120__      1 MARKLFTPWTVKDVTIKNRIVMAPMCMYSSHEKDGKLQPFHMAHYISRAI     50

BSNT_03541___     51 GQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIG    100
                     ||||||||||:||||||||:|||||||||:|||||||||||||.||||||
RBAM_022120__     51 GQVGLIIVEATAVNPQGRISDQDLGIWSDDHIEGFAKLTEQVKAQGSKIG    100

BSNT_03541___    101 IQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAA    150
                     ||||||||||||||||:|||||.|||||.||.||:.|::|||:|||||||
RBAM_022120__    101 IQLAHAGRKAELEGDIYAPSAIPFDEQSKTPAEMTTEQIKETIQEFKQAA    150

BSNT_03541___    151 ARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREI    200
                     |||||||||:||:|||||||:||||||||||||||||||.|||||||.|.
RBAM_022120__    151 ARAKEAGFDIIELHAAHGYLMHEFLSPLSNHRTDEYGGSHENRYRFLGET    200

BSNT_03541___    201 IDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS    250
                     |:.||:|||||||||:||||||||||||||||||||||||||||||||||
RBAM_022120__    201 IEAVKEVWDGPLFVRISASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS    250

BSNT_03541___    251 GALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGR    300
                     ||||.|||||||||||||||||||||::||||||:||.|:||||||||.|
RBAM_022120__    251 GALVQADINVFPGYQVSFAEKIREQAEIATGAVGLITTGTMAEEILQNNR    300

BSNT_03541___    301 ADLIFIGRELLRDPFFARTAAKQLNTEIPAPVQYERGW    338
                     |||||:.|||||||.|||:||||||||||:||||:|.|
RBAM_022120__    301 ADLIFVARELLRDPHFARSAAKQLNTEIPSPVQYDRAW    338


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