Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03541 and RBAM_022120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence pep-align/BSNT_03541___namA.1.9828.seq
# -bsequence pep-align/RBAM_022120___yqjM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03541___namA-RBAM_022120___yqjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03541___namA-RBAM_022120___yqjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03541___namA
# 2: RBAM_022120___yqjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 295/338 (87.3%)
# Similarity: 321/338 (95.0%)
# Gaps: 0/338 ( 0.0%)
# Score: 1569.0
#
#
#=======================================
BSNT_03541___ 1 MARKLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAI 50
||||||||.|:||:|:||||||:||||||||||||||.||||||||||||
RBAM_022120__ 1 MARKLFTPWTVKDVTIKNRIVMAPMCMYSSHEKDGKLQPFHMAHYISRAI 50
BSNT_03541___ 51 GQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIG 100
||||||||||:||||||||:|||||||||:|||||||||||||.||||||
RBAM_022120__ 51 GQVGLIIVEATAVNPQGRISDQDLGIWSDDHIEGFAKLTEQVKAQGSKIG 100
BSNT_03541___ 101 IQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAA 150
||||||||||||||||:|||||.|||||.||.||:.|::|||:|||||||
RBAM_022120__ 101 IQLAHAGRKAELEGDIYAPSAIPFDEQSKTPAEMTTEQIKETIQEFKQAA 150
BSNT_03541___ 151 ARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREI 200
|||||||||:||:|||||||:||||||||||||||||||.|||||||.|.
RBAM_022120__ 151 ARAKEAGFDIIELHAAHGYLMHEFLSPLSNHRTDEYGGSHENRYRFLGET 200
BSNT_03541___ 201 IDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS 250
|:.||:|||||||||:||||||||||||||||||||||||||||||||||
RBAM_022120__ 201 IEAVKEVWDGPLFVRISASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS 250
BSNT_03541___ 251 GALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGR 300
||||.|||||||||||||||||||||::||||||:||.|:||||||||.|
RBAM_022120__ 251 GALVQADINVFPGYQVSFAEKIREQAEIATGAVGLITTGTMAEEILQNNR 300
BSNT_03541___ 301 ADLIFIGRELLRDPFFARTAAKQLNTEIPAPVQYERGW 338
|||||:.|||||||.|||:||||||||||:||||:|.|
RBAM_022120__ 301 ADLIFVARELLRDPHFARSAAKQLNTEIPSPVQYDRAW 338
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