Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03541 and RBAM_022120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence dna-align/BSNT_03541___namA.1.9828.seq
# -bsequence dna-align/RBAM_022120___yqjM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03541___namA-RBAM_022120___yqjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03541___namA-RBAM_022120___yqjM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03541___namA
# 2: RBAM_022120___yqjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1020
# Identity: 817/1020 (80.1%)
# Similarity: 817/1020 (80.1%)
# Gaps: 6/1020 ( 0.6%)
# Score: 3237.0
#
#
#=======================================
BSNT_03541___ 1 ATGGCCAGAAAATTATTTACACCTAT-TACAATTAAAGATATGACGTTAA 49
|||||||||||||||||.||||| || .||..||||||||.|.|||.|.|
RBAM_022120__ 1 ATGGCCAGAAAATTATTCACACC-ATGGACCGTTAAAGATGTAACGATCA 49
BSNT_03541___ 50 AAAACCGCATTGTCATGTCGCCAATGTGCATGTATTCTTCTCATGAAAAG 99
|||||||.|||||.|||.|.||.||||||||||||||.||.|||||.|||
RBAM_022120__ 50 AAAACCGTATTGTTATGGCACCGATGTGCATGTATTCCTCACATGAGAAG 99
BSNT_03541___ 100 GACGGAAAATTAACA-CCGTTCCACATGGCACATTACATATCGCGCGCAA 148
|||||||||.| .|| ||.||.||.|||||.||.|||||||||||.||||
RBAM_022120__ 100 GACGGAAAACT-GCAGCCTTTTCATATGGCGCACTACATATCGCGTGCAA 148
BSNT_03541___ 149 TCGGCCAGGTCGGACTGATTATTGTAGAGGCGTCAGCGGTTAACCCTCAA 198
||||.||||||||.||||||||.||.||.|||.||||.|||||.||||||
RBAM_022120__ 149 TCGGACAGGTCGGCCTGATTATCGTGGAAGCGACAGCCGTTAATCCTCAA 198
BSNT_03541___ 199 GGACGAATCACTGACCAAGACTTAGGCATTTGGAGCGACGAGCATATTGA 248
||.||.||..|.||.||.||.||.||||||||||||||.||.|||||.||
RBAM_022120__ 199 GGGCGCATTTCCGATCAGGATTTGGGCATTTGGAGCGATGATCATATCGA 248
BSNT_03541___ 249 AGGCTTTGCAAAACTGACTGAGCAGGTCAAAGAACAAGGTTCAAAAATCG 298
|||.|||||.||||||||.||.||.||.||||..|||||.||.|||||||
RBAM_022120__ 249 AGGTTTTGCCAAACTGACGGAACAAGTGAAAGCGCAAGGATCTAAAATCG 298
BSNT_03541___ 299 GCATTCAGCTTGCCCATGCCGGACGTAAAGCTGAGCTTGAAGGAGATATC 348
|||||||||||||.||.|||||||||||||||||||||||.|||||.||.
RBAM_022120__ 299 GCATTCAGCTTGCACACGCCGGACGTAAAGCTGAGCTTGAGGGAGACATT 348
BSNT_03541___ 349 TTCGCTCCATCGGCGATTGCGTTTGACGAACAATCAGCAACACCTGTAGA 398
|.||||||.||.||.|||.||||.||.||.||.||...||||||.|..||
RBAM_022120__ 349 TACGCTCCGTCAGCCATTCCGTTCGATGAGCAGTCCAAAACACCGGCTGA 398
BSNT_03541___ 399 AATGTCAGCAGAAAAAGTAAAAGAAACAGTTCAGGAGTTCAAGCAAGCGG 448
||||.|..|||||.||.|.||||||||..|||||||.|||||.||.||.|
RBAM_022120__ 399 AATGACGACAGAACAAATTAAAGAAACCATTCAGGAATTCAAACAGGCAG 448
BSNT_03541___ 449 CTGCCCGCGCAAAAGAAGCCGGCTTTGATGTGATTGAAATTCATGCGGCG 498
|.||.|||||.|||||||||||||||||..|.||||||.||||||||||.
RBAM_022120__ 449 CGGCGCGCGCGAAAGAAGCCGGCTTTGACATTATTGAACTTCATGCGGCA 498
BSNT_03541___ 499 CACGGATATTTAATTCATGAATTTTTGTCTCCGCTTTCCAACCATCGCAC 548
|||||.||.|||||.||.|||||||||||.||.||.|||||.||.||.||
RBAM_022120__ 499 CACGGCTACTTAATGCACGAATTTTTGTCCCCTCTGTCCAATCACCGTAC 548
BSNT_03541___ 549 AGATGAATACGGCGGCTCACCTGAAAACCGCTATCGTTTCTTGAGAGAGA 598
|||.||||||||.|||||||.||||||.|||||.||.|||||..|.||||
RBAM_022120__ 549 AGACGAATACGGAGGCTCACATGAAAATCGCTACCGCTTCTTAGGCGAGA 598
BSNT_03541___ 599 TCATTGATGAAGTCAAACAAGTATGGGACGGTCCTTTATTTGTCCGTGTA 648
.||||||.|..|||||..||||.||||||||.||.||||||||||||.|.
RBAM_022120__ 599 CCATTGAAGCCGTCAAGGAAGTCTGGGACGGCCCGTTATTTGTCCGTATT 648
BSNT_03541___ 649 TCTGCTTCTGACTACACTGACAAAGGCTTAGACATTGCCGATCACATCGG 698
|||||.||.||.||.||.||||||||..|.||||||||.|||||.|||||
RBAM_022120__ 649 TCTGCATCGGATTATACAGACAAAGGGCTGGACATTGCAGATCATATCGG 698
BSNT_03541___ 699 TTTTGCAAAATGGATGAAGGAGCAGGGAGTTGACTTAATTGACTGCAGCT 748
||||||.||.||||||||.||.||||||||.|||.|.|||||.|||||||
RBAM_022120__ 699 TTTTGCGAAGTGGATGAAAGAACAGGGAGTCGACCTCATTGATTGCAGCT 748
BSNT_03541___ 749 CAGGCGCCCTTGTTCACGCAGACATTAACGTATTCCCTGGCTATCAGGTC 798
|||||||.||.|||||.||.||.|||||.||.|||||.|||||.||.||.
RBAM_022120__ 749 CAGGCGCACTCGTTCAAGCTGATATTAATGTCTTCCCAGGCTACCAAGTG 798
BSNT_03541___ 799 AGCTTCGCTGAGAAAATCCGTGAACAGGCGGACATGGCTACTGGTGCCGT 848
||||||||.||||||||||||||||||||.||.||.||.||.||.|||||
RBAM_022120__ 799 AGCTTCGCAGAGAAAATCCGTGAACAGGCCGAAATCGCAACAGGCGCCGT 848
BSNT_03541___ 849 CGGCATGATTACAGAC-GGTTCAATGGCTGAAGAAATTCTGCAAAACGGA 897
|||..||||.|| ||| ||..|||||||.||||||||||||||||||...
RBAM_022120__ 849 CGGTTTGATAAC-GACGGGAACAATGGCGGAAGAAATTCTGCAAAACAAC 897
BSNT_03541___ 898 CGTGCCGACCTCATCTTTATCGGCAGAGAGCTTTTGCGGGATCCATTCTT 947
||.||.|||||.||.|||.|||..|||||.|||.||||.|||||...|||
RBAM_022120__ 898 CGCGCTGACCTTATTTTTGTCGCAAGAGAACTTCTGCGCGATCCGCACTT 947
BSNT_03541___ 948 TGCAAGAACTGCTGCGAAACAGCTCAATACAGAGATTCCGGCCCCTGTTC 997
||||||.|.|||.|||||.|||||.|||||.||.||.|||.|.||.||||
RBAM_022120__ 948 TGCAAGGAGTGCAGCGAAGCAGCTGAATACTGAAATACCGTCACCGGTTC 997
BSNT_03541___ 998 AATACGAAAGAGGCTGGTAA 1017
|||||||.||||..||||.|
RBAM_022120__ 998 AATACGACAGAGCATGGTGA 1017
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