Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03537 and RBAM_021920

See DNA alignment / Visit BSNT_03537 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:47
# Commandline: needle
#    -asequence pep-align/BSNT_03537___yqjP.1.9828.seq
#    -bsequence pep-align/RBAM_021920___yqjP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03537___yqjP-RBAM_021920___yqjP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03537___yqjP-RBAM_021920___yqjP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03537___yqjP
# 2: RBAM_021920___yqjP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     188/319 (58.9%)
# Similarity:   240/319 (75.2%)
# Gaps:           1/319 ( 0.3%)
# Score: 979.0
# 
#
#=======================================

BSNT_03537___      1 MTTEDVIAIRVPTPFAVGDVIVYLVKGDALTLIDAGPNTKEAARALQEQL     50
                     |....:|.||||||||||||||||||.:||||||.||||||||.:|..||
RBAM_021920__      1 MAARKIIPIRVPTPFAVGDVIVYLVKDEALTLIDCGPNTKEAAESLSLQL     50

BSNT_03537___     51 AAVNVKLSDIEQVVLTHHHADHAGLLDVFSDEIEVIGHAFNEPYISRNQA    100
                     ....|..:||||||||||||||:|||.:||::.|||||..|:.||::||:
RBAM_021920__     51 KEHGVSAADIEQVVLTHHHADHSGLLHLFSEDTEVIGHPLNDRYITQNQS    100

BSNT_03537___    101 FMDWQKRFFQKLLPELGVPFDTGKAEKLMRSAYAFSCTRSLTKSIREGMG    150
                     ::..|:.||..|:.|:|||.......|.::.:|.||..|.|||::|||..
RBAM_021920__    101 YIARQEDFFLSLMTEMGVPLTPEDIHKTVKLSYLFSANRPLTKTVREGGK    150

BSNT_03537___    151 IDGLEGWSVLEMPGHAESHIVLFHEKSGRMLGGDLLLANSSSNPILEAPK    200
                     ||||.||:|||:||||.|||.|:|||||.|..|||||:|||:|||||||:
RBAM_021920__    151 IDGLNGWTVLEIPGHAASHIALYHEKSGEMFSGDLLLSNSSTNPILEAPE    200

BSNT_03537___    201 AGDVRSKPLVDYQRSLRRLSQLDPTIVFPGHGEPITSVQALIEKRFDKQR    250
                     .| ||:.|::||..|::||..::|:.::||||:.:|.|:...::|.:|||
RBAM_021920__    201 KG-VRAAPMLDYLNSMKRLYDVNPSFLYPGHGDLLTDVKPAFDRRLEKQR    249

BSNT_03537___    251 NRTEDVRRMLDEKPMTAFQVCQQLFPAVYEKELFLTMSETAGHLDVLEAE    300
                     ||:|.|.|:|.|:.:||||||::|||||||.|||||||||.||||||.||
RBAM_021920__    250 NRSEYVLRLLSEETLTAFQVCRRLFPAVYENELFLTMSETIGHLDVLAAE    299

BSNT_03537___    301 EAITSYWEGNTAYFKTMKR    319
                     ....|:..|||..||.:|.
RBAM_021920__    300 GKAVSFQSGNTLKFKAVKG    318


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