Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03535 and RBAM_021900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence pep-align/BSNT_03535___dsdA.1.9828.seq
# -bsequence pep-align/RBAM_021900___dsdA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03535___dsdA-RBAM_021900___dsdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03535___dsdA-RBAM_021900___dsdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03535___dsdA
# 2: RBAM_021900___dsdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 301/453 (66.4%)
# Similarity: 357/453 (78.8%)
# Gaps: 9/453 ( 2.0%)
# Score: 1576.0
#
#
#=======================================
BSNT_03535___ 1 ---MSVHSEVLHALLKDPFIQKLIDAEPVFWANSGKKEGPLPRADEWATE 47
..:|. ||:.:|.::::.:|..|||.|..|.:.|:....||..|
RBAM_021900__ 1 MSDRDIHK----ALMAEPLVRQMAEAREVFWINPHKTDDPVKHGAEWKKE 46
BSNT_03535___ 48 IAEAEKRMRRFAPYIAEVFPETKGAKGIIESPLFEVQHMKEKLEAAYQQP 97
|||||:|:||||||||..||||:...|:|||||..:..||:.||.:..|.
RBAM_021900__ 47 IAEAEERLRRFAPYIASAFPETEAEGGLIESPLVLINEMKKHLEHSAAQA 96
BSNT_03535___ 98 FPGRWLLKCDHELPISGSIKARGGIYEVLKHAENLALQEGMLRETDDYRI 147
||||.|||||.|||||||||||||||||||.||:||::.|||...|||.|
RBAM_021900__ 97 FPGRLLLKCDDELPISGSIKARGGIYEVLKLAEDLAVKAGMLSADDDYSI 146
BSNT_03535___ 148 LQEERFTGFFSRYSIAVGSTGNLGLSIGIIGAALGFRVTVHMSADAKQWK 197
|.|||||.|||:||||||||||||||||||||.|||.||||||:||||||
RBAM_021900__ 147 LTEERFTAFFSKYSIAVGSTGNLGLSIGIIGAKLGFCVTVHMSSDAKQWK 196
BSNT_03535___ 198 KDLLRQKGVTVMEYETDYSEAVNEGRRQAEQDPFCYFIDDEHSRQLFLGY 247
|:|||:|||.|:|||.|||.||.|||.||:|||:||||||||||.|||||
RBAM_021900__ 197 KELLREKGVRVIEYEADYSLAVKEGRMQAKQDPYCYFIDDEHSRDLFLGY 246
BSNT_03535___ 248 AVAASRLKTQLDCMNIQPSLETPLFVYLPCGVGGGPGGVAFGLKLLYGDD 297
|||.||:|.|||.|||:|..:.||||||||||||||||||..|||:||:.
RBAM_021900__ 247 AVAGSRVKKQLDQMNIKPDADEPLFVYLPCGVGGGPGGVALALKLIYGEH 296
BSNT_03535___ 298 VHVFFAEPTHSPCMLLGLYSGLHEKISVQDIGLDNQTAADGLAVGRPSGF 347
||:||.||||||||||||:||||:.||||||||||||||||||||||||.
RBAM_021900__ 297 VHIFFGEPTHSPCMLLGLFSGLHDGISVQDIGLDNQTAADGLAVGRPSGL 346
BSNT_03535___ 348 VGKLIEPLLSGCYTVEDNTLYTLLHMLAVSEDKYLEPSALAGMFGPVQLF 397
.|.|:||:||||||.:|.||::||:.|..:|:|.||||||||:.|.|::.
RBAM_021900__ 347 AGPLMEPILSGCYTADDGTLFSLLYQLRAAENKSLEPSALAGLAGAVKVV 396
BSNT_03535___ 398 STEEGRRYGQK--YKMEHAVHVVWGTGGSMVPKDEMAAYNRIGADLLKKR 445
.||.|.||.:: .:||:|||:||.|||||||::||..|:|||:..|||.
RBAM_021900__ 397 QTEAGNRYIKERGLEMENAVHLVWSTGGSMVPEEEMEEYSRIGSSFLKKM 446
BSNT_03535___ 446 NEK 448
..:
RBAM_021900__ 447 GRQ 449
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