Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03527 and RBAM_021830
See
DNA alignment /
Visit
BSNT_03527 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence pep-align/BSNT_03527___yqjW.1.9828.seq
# -bsequence pep-align/RBAM_021830___yqjW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03527___yqjW-RBAM_021830___yqjW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03527___yqjW-RBAM_021830___yqjW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03527___yqjW
# 2: RBAM_021830___yqjW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 271/411 (65.9%)
# Similarity: 324/411 (78.8%)
# Gaps: 3/411 ( 0.7%)
# Score: 1397.5
#
#
#=======================================
BSNT_03527___ 1 MKEKVIFLVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPL 50
|.: |.|||||||||||||||.||||:||||||||||:|.|||||||||
RBAM_021830__ 1 MAD--ILLVDMQSFYASVEKAEAPHLKSRPVIVSGDPERRSGVVLAACPL 48
BSNT_03527___ 51 AKQKGVVNASRLWEAQEKCPEAVVLRPRMQRYIDVSLQITAILEEYTDLV 100
||:.||.||.||||||.|||:||::|||||||||||:.||.:.|.|||||
RBAM_021830__ 49 AKRYGVKNAERLWEAQAKCPDAVIVRPRMQRYIDVSVMITELFERYTDLV 98
BSNT_03527___ 101 EPYSIDEQFMDITGSQKLFGTPMEIAKSIQGRIMREIGVYARVGIGPNKA 150
|||||||||:|:|||::|||.|..||||||..||||.|:|||||||||||
RBAM_021830__ 99 EPYSIDEQFLDVTGSRRLFGDPFTIAKSIQQAIMREFGIYARVGIGPNKA 148
BSNT_03527___ 151 LAKIACDNFAKKNKNGIFTLTKENMKTEMWPLPVGSMFGVGSRMKHHLNR 200
|:|:|||:|||||.:||..|...|::.::||||||.:||:|.||:|||.|
RBAM_021830__ 149 LSKMACDHFAKKNASGIHRLDMSNIRQDLWPLPVGKLFGIGKRMEHHLRR 198
BSNT_03527___ 201 MGISTIGGLAAFPLDLLKKKWGINGHVLWMTANGIDYSPVSTSSLDGQKA 250
||||||||||..|.:||||:|||||.:|..||.|||.|||:.::...|||
RBAM_021830__ 199 MGISTIGGLAGHPAELLKKRWGINGELLQRTARGIDPSPVTVNTHSRQKA 248
BSNT_03527___ 251 IGHGMTLPRDYEHFDKEIKVVLLELSEEVCRRSRNAGVMGQTVSVSCRGA 300
|||.|||||||..|: :||||||||||||.||:|....:|.|||||.|||
RBAM_021830__ 249 IGHNMTLPRDYSRFE-DIKVVLLELSEEVARRARFKQYIGHTVSVSIRGA 297
BSNT_03527___ 301 DFDWPTGFNRQVKLAEPTNSTQDVYEAVRRLFLTFWDGKPVRRLGVNLSQ 350
||::|:.|:||.||..|||...|:::...:||...|:|:|||..||:|||
RBAM_021830__ 298 DFEFPSDFHRQRKLVSPTNFGMDIFKTAVKLFKEHWNGEPVRSAGVSLSQ 347
BSNT_03527___ 351 LSSDDIWQLNLFQDYAKKMSLGYVMDGIKNRFGDTAIIRAASLTAAGQAF 400
|...|..||:||....||:|||.|:|.|..|:|..:::.|||||.|||||
RBAM_021830__ 348 LEPCDYVQLSLFDAQEKKISLGKVLDDIHERYGPASLLHAASLTEAGQAF 397
BSNT_03527___ 401 ERAAKIGGHYK 411
.||.|||||||
RBAM_021830__ 398 HRAEKIGGHYK 408
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.