Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03524 and RBAM_021820

See DNA alignment / Visit BSNT_03524 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03524___yqjY.1.9828.seq
#    -bsequence pep-align/RBAM_021820___yqjY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03524___yqjY-RBAM_021820___yqjY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03524___yqjY-RBAM_021820___yqjY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03524___yqjY
# 2: RBAM_021820___yqjY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     134/156 (85.9%)
# Similarity:   144/156 (92.3%)
# Gaps:           0/156 ( 0.0%)
# Score: 727.0
# 
#
#=======================================

BSNT_03524___      1 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHN     50
                     ||||||||.|||||||||||||||||:|:|||||||||||||||||....
RBAM_021820__      1 MDIRTITSEDYEMVTSVLNEWWGGRQMKDKLPRLFFEHFQDTSFITYGPE     50

BSNT_03524___     51 SMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRG    100
                     .|||||||||||||||||||||||||||||||||||||||.|:||||:||
RBAM_021820__     51 GMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDRFMETVKKRG    100

BSNT_03524___    101 CTRVKCVTSPANKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRV    150
                     ||:|.|||:|.|||||||||||||:.||||||||||.|||||||||:||:
RBAM_021820__    101 CTKVNCVTAPVNKVSIAYHTKLGFEAEKGTKTVNGIPVFANYDGPGEDRI    150

BSNT_03524___    151 LFVKNI    156
                     ||||.:
RBAM_021820__    151 LFVKYM    156


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