Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03524 and RBAM_021820

See Amino acid alignment / Visit BSNT_03524 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:47
# Commandline: needle
#    -asequence dna-align/BSNT_03524___yqjY.1.9828.seq
#    -bsequence dna-align/RBAM_021820___yqjY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03524___yqjY-RBAM_021820___yqjY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03524___yqjY-RBAM_021820___yqjY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03524___yqjY
# 2: RBAM_021820___yqjY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity:     375/473 (79.3%)
# Similarity:   375/473 (79.3%)
# Gaps:           4/473 ( 0.8%)
# Score: 1488.5
# 
#
#=======================================

BSNT_03524___      1 ATGGATATTCGAACAATCACGTCTTCAGATTATGAAATGGTAACGTCTGT     50
                     |||||||||||||||||.||.|||..|||.|||||||||||.||||||||
RBAM_021820__      1 ATGGATATTCGAACAATTACCTCTGAAGACTATGAAATGGTTACGTCTGT     50

BSNT_03524___     51 ACTGAATGAATGGTGGGGCGGCAGACAGCTGAAAGAAAAATTGCCGAGAC    100
                     ..||||||||||||||||||||||.|||.|||||||.|||.|||||.|..
RBAM_021820__     51 TTTGAATGAATGGTGGGGCGGCAGGCAGATGAAAGACAAACTGCCGCGCT    100

BSNT_03524___    101 TATTTTTTGAGCATTTTCAGGACACAAGCTTTATTACATCCGAACATAAC    150
                     |.||||||||.|||||||||||||||||||||||.||.|.||..|...|.
RBAM_021820__    101 TGTTTTTTGAACATTTTCAGGACACAAGCTTTATCACGTACGGGCCGGAG    150

BSNT_03524___    151 AGCATGACCGGATTTTTAATCGGATTTCAATCGCAATCGGATCCTGAAAC    200
                     .|.||||||||.|||||||||||.|||||.||.|||||.||.|||||.||
RBAM_021820__    151 GGAATGACCGGTTTTTTAATCGGTTTTCAGTCACAATCAGACCCTGAGAC    200

BSNT_03524___    201 GGCGTACATTCATTTTTCCGGTGTGCATCCAGATTTCAGAAAAATGCAAA    250
                     .||.||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_021820__    201 AGCCTACATTCATTTTTCCGGTGTGCATCCGGATTTCAGAAAAATGCAAA    250

BSNT_03524___    251 TTGGGAAACAATTGTATGATGTATTTATCGAAACAGTAAAACAAAGAGGC    300
                     ||||.|||||..|.||.||...||||||.||.||.||.||..||||.|||
RBAM_021820__    251 TTGGAAAACAGCTCTACGACCGATTTATGGAGACGGTGAAGAAAAGGGGC    300

BSNT_03524___    301 TGCACCCGGGTGAAGTGCGTCACTTCACCTGCGAATAAGGTATCAATCGC    350
                     |||||....||.||.|||||.||..|.||||..|||||.|||||||||||
RBAM_021820__    301 TGCACGAAAGTCAATTGCGTGACGGCGCCTGTCAATAAAGTATCAATCGC    350

BSNT_03524___    351 ATATCACACAAAATTGGGGTTTGATATTGAAAAGGGCACCAAGACGGTAA    400
                     .|||||.||||||||.||.|||||...||||||.||.|||||.||.||||
RBAM_021820__    351 TTATCATACAAAATTAGGATTTGAAGCTGAAAAAGGAACCAAAACCGTAA    400

BSNT_03524___    401 ATGGCATCTCAGTGTTTGCAAACTATGATGGCCCGGGCCAAGACAGGGTA    450
                     |.||.|||.|.||.|||||.||.|||||.||.|||||..|||||.||.|.
RBAM_021820__    401 ACGGAATCCCTGTTTTTGCGAATTATGACGGTCCGGGAGAAGACCGGATT    450

BSNT_03524___    451 CTGTTTGTCAAAAACATATGA--    471
                     ||||||||  .|||.|||||.  
RBAM_021820__    451 CTGTTTGT--GAAATATATGTAG    471


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