Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03518 and RBAM_021780

See DNA alignment / Visit BSNT_03518 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03518___yqkC.1.9828.seq
#    -bsequence pep-align/RBAM_021780___yqkC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03518___yqkC-RBAM_021780___yqkC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03518___yqkC-RBAM_021780___yqkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03518___yqkC
# 2: RBAM_021780___yqkC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 79
# Identity:      67/79 (84.8%)
# Similarity:    74/79 (93.7%)
# Gaps:           0/79 ( 0.0%)
# Score: 368.0
# 
#
#=======================================

BSNT_03518___      1 MEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESIKKDVWLLQDE     50
                     |.|||||:|.|||:||||||||.||||:|||||||||||::|||||||||
RBAM_021780__      1 MNQKLKAIKQTAQHKTWVSFLNNNHPYSLLHWSIGGAESVQKDVWLLQDE     50

BSNT_03518___     51 MTFETQEFTTIDLAIEWIRENMDGITDVL     79
                     |||:.||||||||||:||.||||||||||
RBAM_021780__     51 MTFKAQEFTTIDLAIDWIGENMDGITDVL     79


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