Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03514 and RBAM_021760

See DNA alignment / Visit BSNT_03514 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03514___yqkE.1.9828.seq
#    -bsequence pep-align/RBAM_021760___yqkE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03514___yqkE-RBAM_021760___yqkE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03514___yqkE-RBAM_021760___yqkE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03514___yqkE
# 2: RBAM_021760___yqkE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 75
# Identity:      51/75 (68.0%)
# Similarity:    66/75 (88.0%)
# Gaps:           1/75 ( 1.3%)
# Score: 284.0
# 
#
#=======================================

BSNT_03514___      1 -MKKQKPADKHQLKDGLQSDIKAKLMEMKSQLKEEDEKRQEREKAEQIRK     49
                      ||||.|.:||.|||.|:.|:||:|::|||:|||||||:|.::|||||||
RBAM_021760__      1 MMKKQLPKEKHSLKDDLEEDLKARLLQMKSELKEEDEKKQAQQKAEQIRK     50

BSNT_03514___     50 KREIEKNKSFEELLNESQMDWHQYK     74
                     ::|.||:||||||||||.:|||:||
RBAM_021760__     51 RKEKEKHKSFEELLNESSLDWHKYK     75


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