Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03513 and RBAM_021750

See DNA alignment / Visit BSNT_03513 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_03513___yqkF.1.9828.seq
#    -bsequence pep-align/RBAM_021750___yqkF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03513___yqkF-RBAM_021750___yqkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03513___yqkF-RBAM_021750___yqkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03513___yqkF
# 2: RBAM_021750___yqkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     247/306 (80.7%)
# Similarity:   276/306 (90.2%)
# Gaps:           0/306 ( 0.0%)
# Score: 1281.0
# 
#
#=======================================

BSNT_03513___      1 MRKRKLGTSDLDISEVGLGCMSLGTEKNKALSILDEAIELGINYLDTADL     50
                     ||||.||.|||:|||:|||||||||:|.||||||||||||||||||||||
RBAM_021750__      1 MRKRTLGHSDLEISEIGLGCMSLGTDKAKALSILDEAIELGINYLDTADL     50

BSNT_03513___     51 YDRGRNEEMVGDAIQNRRQDIILATKAGNRWDDGSEGWYWDPSKAYIKEA    100
                     ||.|||||:||:|::|||.||||||||||||:|..:||:||.||.|||||
RBAM_021750__     51 YDFGRNEEIVGEAVKNRRHDIILATKAGNRWNDDKDGWHWDASKGYIKEA    100

BSNT_03513___    101 VKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISS    150
                     ||.||.||||||||||||||||:||:|||||||||:||||||||||||||
RBAM_021750__    101 VKNSLRRLKTDYIDLYQLHGGTMEDHIDETIEAFEDLKQEGVIRYYGISS    150

BSNT_03513___    151 IRPNVIKEYVKKSNIVSIMMQFSLFDRRPEEWLPLLEEHQISVVARGPVA    200
                     |||||||||||||||.|:|||:||.|||||||||||||:.||||||||||
RBAM_021750__    151 IRPNVIKEYVKKSNITSVMMQYSLLDRRPEEWLPLLEENGISVVARGPVA    200

BSNT_03513___    201 KGLLTEKPLDQASDSMKQNGYLSYSFEELTNARKAMEEVAPDLSMTEKSL    250
                     ||||||||||||:.|:|:||||:|||.||...:||:...||||||||.||
RBAM_021750__    201 KGLLTEKPLDQAAASVKENGYLTYSFAELEETKKAISAAAPDLSMTELSL    250

BSNT_03513___    251 QYLLAQPAVASVITGASKIEQLRENIQAANARRLTEEEIKALQSHTKQDI    300
                     ||||:||||||||||||.:||||||..||.||||:.:||||||.|||:|:
RBAM_021750__    251 QYLLSQPAVASVITGASSLEQLRENCSAAEARRLSSQEIKALQYHTKRDV    300

BSNT_03513___    301 YKTHRS    306
                     |:.|||
RBAM_021750__    301 YEAHRS    306


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