Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03509 and RBAM_021720

See DNA alignment / Visit BSNT_03509 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence pep-align/BSNT_03509___ansR.1.9828.seq
#    -bsequence pep-align/RBAM_021720___ansR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03509___ansR-RBAM_021720___ansR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03509___ansR-RBAM_021720___ansR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03509___ansR
# 2: RBAM_021720___ansR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      86/117 (73.5%)
# Similarity:    97/117 (82.9%)
# Gaps:           1/117 ( 0.9%)
# Score: 426.0
# 
#
#=======================================

BSNT_03509___      1 MNLDRLTELRKKKNWSLQYTADLLGIAKSTYAGYESGYRRPSLEALAMLA     50
                     ||||||||||||||||||||||.|||||||||||||||||||.|||..||
RBAM_021720__      1 MNLDRLTELRKKKNWSLQYTADRLGIAKSTYAGYESGYRRPSFEALGTLA     50

BSNT_03509___     51 DLFDTTCDELLGR-EKQKQTAPQAIELATWSSLDFTISVDGQPLSEDEII     99
                     ||||||||:|||| ||:.:...|.|||...:.....::||||||::||||
RBAM_021720__     51 DLFDTTCDDLLGRTEKKAEAFTQTIELTNAAQGRGILTVDGQPLNQDEII    100

BSNT_03509___    100 QLITFIRTKRKVQEELS    116
                     :||.|:|||:||||||.
RBAM_021720__    101 ELIAFVRTKKKVQEELR    117


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.