Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03509 and RBAM_021720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:45
# Commandline: needle
# -asequence dna-align/BSNT_03509___ansR.1.9828.seq
# -bsequence dna-align/RBAM_021720___ansR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03509___ansR-RBAM_021720___ansR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03509___ansR-RBAM_021720___ansR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03509___ansR
# 2: RBAM_021720___ansR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 268/376 (71.3%)
# Similarity: 268/376 (71.3%)
# Gaps: 47/376 (12.5%)
# Score: 958.5
#
#
#=======================================
BSNT_03509___ 1 ATGAATCTAGATCGTTTAACTGAATTGAGAAAAAAGAAAAATTGGTCGCT 50
||||||.|||||||||||||||||.||||||||||||||||||||||.||
RBAM_021720__ 1 ATGAATTTAGATCGTTTAACTGAACTGAGAAAAAAGAAAAATTGGTCTCT 50
BSNT_03509___ 51 TCAATATACAGCTGACCTTCTCGGTATCGCAAAAAGCACATATGCCGGCT 100
|||||||||.|||||||.||||||.|||||.||||||||.||.|||||.|
RBAM_021720__ 51 TCAATATACGGCTGACCGTCTCGGCATCGCCAAAAGCACGTACGCCGGGT 100
BSNT_03509___ 101 ACGAGTCAGGCTACCGACGGCCTTCACTTGAAGCGCTTGCCATGCTGGCT 150
|.||.|||||.|||||.|||||.|||.|.||.|||||.|.||.|||.||.
RBAM_021720__ 101 ATGAATCAGGGTACCGGCGGCCGTCATTCGAGGCGCTGGGCACGCTTGCC 150
BSNT_03509___ 151 GACCTCTTTGACACAACCTGCGATGAACTTTTA---GGCCGCGA--GAAA 195
||.||.||||||||.||.|||||.|| |||| ||.||| | ||||
RBAM_021720__ 151 GATCTGTTTGACACGACGTGCGACGA---TTTACTGGGGCGC-ACTGAAA 196
BSNT_03509___ 196 CAAAAGCAGACTGC---TCCTCAGGCCATAGAATT--------------- 227
.|||.||.|| .|| |.|.|||.||||.|||||
RBAM_021720__ 197 AAAAGGCGGA-GGCGTTTACCCAGACCATCGAATTAACAAACGCCGCACA 245
BSNT_03509___ 228 -GGCCACGTGGAGCAGCCTTGACTTTACCATTTCTGTTGATGGCCAGCCG 276
||||.|| ||| ||| |..|.|||||.||.||||||
RBAM_021720__ 246 AGGCCGCG----GCA----------TAC--TGACCGTTGACGGACAGCCG 279
BSNT_03509___ 277 CTGAGTGAAGATGAAATCATCCAGCTGATTACCTTTATACGCAC-AAAAA 325
||.|...|.||||||||||||.|..|||||.|.|||.|.||||| |||||
RBAM_021720__ 280 CTTAACCAGGATGAAATCATCGAATTGATTGCGTTTGTCCGCACGAAAAA 329
BSNT_03509___ 326 GAAAAGTACAGGAGGAACTGAGTTAA 351
| ||.||.||||||||.||..|.|||
RBAM_021720__ 330 G-AAGGTGCAGGAGGAGCTCCGCTAA 354
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