Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03502 and RBAM_021650

See DNA alignment / Visit BSNT_03502 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence pep-align/BSNT_03502___spoIIM.1.9828.seq
#    -bsequence pep-align/RBAM_021650___spoIIM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03502___spoIIM-RBAM_021650___spoIIM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03502___spoIIM-RBAM_021650___spoIIM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03502___spoIIM
# 2: RBAM_021650___spoIIM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 214
# Identity:     174/214 (81.3%)
# Similarity:   203/214 (94.9%)
# Gaps:           0/214 ( 0.0%)
# Score: 933.0
# 
#
#=======================================

BSNT_03502___      1 MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDL     50
                     |||.|||::|.|||||||||||||.|||.|||||||||||||||:|||||
RBAM_021650__      1 MRKQSYKELFFRHVKDHLSLYIFVFVLFLMGVIFGAIIVNSMTITQKEDL     50

BSNT_03502___     51 YYYLSQFFGQLSDGKQASSADMFGQSIFHNAKYLGLMWILGISVIGMPII    100
                     |||||:|||||||||.|.:::||.|::||:.|||||||||||||||:|:|
RBAM_021650__     51 YYYLSKFFGQLSDGKHAGASEMFWQAVFHDVKYLGLMWILGISVIGLPVI    100

BSNT_03502___    101 FIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGT    150
                     |||:|||||||||||||||||||::||||||:||||||::||||||||||
RBAM_021650__    101 FIMVFLKGIVVGFTVGFLVNQMGMNGFFLSFISVLPQNIVLIPAYLIMGT    150

BSNT_03502___    151 CAIAFSLKLIRQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAY    200
                     |:||||||||||||||||||||||||||||||||::|:|.::|:||.|||
RBAM_021650__    151 CSIAFSLKLIRQLFVKRSLHDAPIQWFGRYAFVLILIVFFSVIASLLEAY    200

BSNT_03502___    201 LSPVLMEKLTSRLF    214
                     :||:.||||:||:|
RBAM_021650__    201 VSPLFMEKLSSRIF    214


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