Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03502 and RBAM_021650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03502___spoIIM.1.9828.seq
# -bsequence dna-align/RBAM_021650___spoIIM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03502___spoIIM-RBAM_021650___spoIIM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03502___spoIIM-RBAM_021650___spoIIM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03502___spoIIM
# 2: RBAM_021650___spoIIM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 651
# Identity: 492/651 (75.6%)
# Similarity: 492/651 (75.6%)
# Gaps: 12/651 ( 1.8%)
# Score: 1809.0
#
#
#=======================================
BSNT_03502___ 1 ATGCGAAAAATCTCTTATAAGGACATGTTTCTCAGGCATGTCAAAGATCA 50
|||.|||||...||.||.||.||..|||||.|..|.|||||.||.|||||
RBAM_021650__ 1 ATGAGAAAACAATCGTACAAAGAACTGTTTTTTCGCCATGTAAAGGATCA 50
BSNT_03502___ 51 TCTCTCTCTTTATATATTTGTGTCAGTGCTGTTTTTCATGGGTGTCATCT 100
|||.||.||||||||||||||||..||..|||||||.|||||.|||||.|
RBAM_021650__ 51 TCTGTCACTTTATATATTTGTGTTCGTCTTGTTTTTGATGGGAGTCATTT 100
BSNT_03502___ 101 TTGGCGCGATTATTGTCAACAGTATGACCATCAGCCAGAAAGAAGATTTA 150
|.||.|||||.||.||||||||.||||||||||..||||||||||||||.
RBAM_021650__ 101 TCGGGGCGATCATCGTCAACAGCATGACCATCACGCAGAAAGAAGATTTG 150
BSNT_03502___ 151 TACTACTACTTAAGTCAA-TTTTTTGGACAGCTTTCGGATGGAAAACAGG 199
||.|||||.||||| ||| |||||.||||||||.||.||.||||||||.|
RBAM_021650__ 151 TATTACTATTTAAG-CAAGTTTTTCGGACAGCTGTCTGACGGAAAACATG 199
BSNT_03502___ 200 CAAG---TTCAGCTGATATGTTTGGGCAAAGTATCTTTCATAATGCAAAG 246
|..| |||| ||.||||||.||||.....||||||||.|||.|||.
RBAM_021650__ 200 CCGGCGCTTCA---GAAATGTTTTGGCAGGCCGTCTTTCATGATGTAAAA 246
BSNT_03502___ 247 TATTTAGGCCTGATGTGGATACTGGGAATTTCCGTCATTGGAATGCCGAT 296
|||||.||.|||||||||||.||.||.||||||||.||.||..|.|||.|
RBAM_021650__ 247 TATTTGGGGCTGATGTGGATCCTCGGTATTTCCGTGATCGGTCTTCCGGT 296
BSNT_03502___ 297 TATTTTCATCATGATCTTTCTGAAAGGGATCGTCGTCGGCTTTACTGTCG 346
|||||||||.|||.|.||..|.|||||.||||||||||||||.||.||||
RBAM_021650__ 297 TATTTTCATTATGGTGTTCTTAAAAGGAATCGTCGTCGGCTTCACGGTCG 346
BSNT_03502___ 347 GGTTCCTAGTCAATCAGATGGGAGTAAGCGGGTTTTTCCTATCTTTTGTC 396
|.||..||||.|||||.|||||..|.|.||||||||||||.||.|||.|.
RBAM_021650__ 347 GTTTTTTAGTGAATCAAATGGGGATGAACGGGTTTTTCCTGTCATTTATT 396
BSNT_03502___ 397 TCCGTTTTGCCGCAAAATGTGCTGCTGATTCCGGCTTATCTCATTATGGG 446
||.|||.||||||||||..|..|.||.||||||||.|||||.||.|||||
RBAM_021650__ 397 TCGGTTCTGCCGCAAAACATCGTTCTCATTCCGGCGTATCTTATCATGGG 446
BSNT_03502___ 447 CACATGTGCAATTGCGTTTTCTTTAAAGTTAATCAGACAGCTGTTCGTGA 496
.|||||..|.||.||.|||||..|.||..|.|||.|.||||||||.||.|
RBAM_021650__ 447 GACATGCTCCATCGCTTTTTCACTGAAACTGATCCGGCAGCTGTTTGTCA 496
BSNT_03502___ 497 AACGAAGCCTGCATGACGCGCCGATTCAATGGTTCGGGCGGTATGCCTTT 546
||||.|||||.||||||||||||||.|||||||||||.||.||.|||||.
RBAM_021650__ 497 AACGCAGCCTTCATGACGCGCCGATCCAATGGTTCGGACGCTACGCCTTC 546
BSNT_03502___ 547 GTGCTGCTGGTCATTCTGTTTTTAGCGCTGATCTCATCTCTCTTTGAAGC 596
||||||.|..||||..|.||.||..||.|.|||.|.||.||..|.||.||
RBAM_021650__ 547 GTGCTGATTCTCATCGTTTTCTTCTCGGTCATCGCCTCGCTGCTCGAGGC 596
BSNT_03502___ 597 ATACTTATCTC--CTGTTTTAATGGAAAAGCTTACATCTAGACTTTTTTA 644
.|||.|.|||| |||||| |||||||||||..||||..|..|.|||||
RBAM_021650__ 597 GTACGTGTCTCCGCTGTTT--ATGGAAAAGCTGTCATCACGCATATTTTA 644
BSNT_03502___ 645 A 645
.
RBAM_021650__ 645 G 645
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