Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03497 and RBAM_021620

See DNA alignment / Visit BSNT_03497 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence pep-align/BSNT_03497___xerD.1.9828.seq
#    -bsequence pep-align/RBAM_021620___xerD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03497___xerD-RBAM_021620___xerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03497___xerD-RBAM_021620___xerD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03497___xerD
# 2: RBAM_021620___xerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     267/296 (90.2%)
# Similarity:   282/296 (95.3%)
# Gaps:           0/296 ( 0.0%)
# Score: 1390.0
# 
#
#=======================================

BSNT_03497___      1 MKDQIKDFIHYVMVERGLSQNTIVSYERDLKSYSLYLTETLHVTDWNHVT     50
                     ||||||||||||.|||||||||::|||||||||||:|||||.:|.||.||
RBAM_021620__      1 MKDQIKDFIHYVRVERGLSQNTMMSYERDLKSYSLFLTETLQITSWNDVT     50

BSNT_03497___     51 RIHIIQYLKHLKDSGKSGKTSARHLASIRSFHQFLLREKVTDKDPSVHIE    100
                     |:||||||||:||||||||||||||||||||||||||||..|||||||||
RBAM_021620__     51 RLHIIQYLKHIKDSGKSGKTSARHLASIRSFHQFLLREKAADKDPSVHIE    100

BSNT_03497___    101 TQKTERALPKVLALNEVERLLDTPKLTSPFGYRDKAMLELLYATGIRVSE    150
                     ||||||.|||||||:|||||||||||.||||.||||||||||||||||||
RBAM_021620__    101 TQKTERTLPKVLALHEVERLLDTPKLDSPFGLRDKAMLELLYATGIRVSE    150

BSNT_03497___    151 MIELKTTDVHLSMGFVRCFGKGRKERIVPIGEAAASAIEEYMTKARGKLL    200
                     |||||.:||||:||||||||||||||||||||||:.|||.|:.|||||||
RBAM_021620__    151 MIELKLSDVHLTMGFVRCFGKGRKERIVPIGEAASHAIEAYIEKARGKLL    200

BSNT_03497___    201 KNNVSDALFLNHHGKQISRQGFWKNLKKIALEAGIKKELTPHTLRHSFAT    250
                     |.||::||||||||:|||||||||||||||||||||||||||||||||||
RBAM_021620__    201 KKNVTEALFLNHHGRQISRQGFWKNLKKIALEAGIKKELTPHTLRHSFAT    250

BSNT_03497___    251 HLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYKQFHPRA    296
                     |||||||||||||||||||||||||||||||||||||||||:||||
RBAM_021620__    251 HLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYKQYHPRA    296


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