Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03497 and RBAM_021620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03497___xerD.1.9828.seq
# -bsequence dna-align/RBAM_021620___xerD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03497___xerD-RBAM_021620___xerD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03497___xerD-RBAM_021620___xerD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03497___xerD
# 2: RBAM_021620___xerD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 905
# Identity: 725/905 (80.1%)
# Similarity: 725/905 (80.1%)
# Gaps: 28/905 ( 3.1%)
# Score: 2908.0
#
#
#=======================================
BSNT_03497___ 1 GTGAAAGATCAAATAAAGGATTTCATCCACTACGTCATGGTAGAGAGAGG 50
|||||.||||||||.||||||||||||||.||.||.|.|||.||.|||||
RBAM_021620__ 1 GTGAAGGATCAAATTAAGGATTTCATCCATTATGTGAGGGTTGAAAGAGG 50
BSNT_03497___ 51 GCTCTCTCAAAATACGATCGTATCCTATGAACGTGACTTGAAAAGCTATT 100
|||.||.|||||||||||..|.||||||||.|||||..|||||||.||||
RBAM_021620__ 51 GCTGTCCCAAAATACGATGATGTCCTATGAGCGTGATCTGAAAAGTTATT 100
BSNT_03497___ 101 CTCTCTACTTAACAGAAACCCTTCATGTTACAGAT-------TGGAATCA 143
||||||.||||||.||||||||| ||||| ||||||.|
RBAM_021620__ 101 CTCTCTTCTTAACTGAAACCCTT-------CAGATCACTTCATGGAATGA 143
BSNT_03497___ 144 CGTTACCCGCATACATATTATCCAATACTTAAAGCATTTGAAGGACTCGG 193
.||.|||||..|.||||||||.|||||.|||||||||.|.||||||||.|
RBAM_021620__ 144 TGTGACCCGTCTTCATATTATTCAATATTTAAAGCATATAAAGGACTCCG 193
BSNT_03497___ 194 GGAAATCCGGCAAGACATCGGCGCGGCATTTGGCATCCATTCGCTCTTTT 243
|||||||.||||||||.||.|||.||||||||||.||.||.||.||||||
RBAM_021620__ 194 GGAAATCAGGCAAGACGTCTGCGAGGCATTTGGCGTCAATCCGGTCTTTT 243
BSNT_03497___ 244 CATCAATTTCTGCTCAGGGAAAAAGTAACGGATAAGGACCCTTCCGTTCA 293
||||||||||||.|.||||||||||...|||||||.||.|||||.||.||
RBAM_021620__ 244 CATCAATTTCTGTTAAGGGAAAAAGCCGCGGATAAAGATCCTTCGGTACA 293
BSNT_03497___ 294 TATCGAAACACAAAAGACGGAACGGGCGCTTCCGAAGGTGCTCGCACTCA 343
|||.|||||||||||.||.||.|||.||||||||||.||..|.||.||..
RBAM_021620__ 294 TATTGAAACACAAAAAACAGAGCGGACGCTTCCGAAAGTATTGGCGCTTC 343
BSNT_03497___ 344 ATGAAGTCGAGCGATTATTGGACACGCCTAAGC-TGACGAGCCCTTTCGG 392
|.|||||.|||||.||||||||||||||||||| |||| |||||.|||||
RBAM_021620__ 344 ACGAAGTTGAGCGGTTATTGGACACGCCTAAGCTTGAC-AGCCCGTTCGG 392
BSNT_03497___ 393 ATATC-GGGATAAAGCAATGCTGGAGCTGCTTTATGCGACAGGCATACGA 441
..|| ||||||||||.|||||.||.|||||.||.|||||.|||||..|.
RBAM_021620__ 393 -CCTCAGGGATAAAGCCATGCTTGAACTGCTGTACGCGACCGGCATCAGG 441
BSNT_03497___ 442 GTCAGTGAAATGATTGAGTTGAAA----ACGACAGATGTTCATTTATCTA 487
|||||.||.|||||.|||.||||| .|||| ||.|||||..|.|
RBAM_021620__ 442 GTCAGCGAGATGATCGAGCTGAAATTATCCGAC----GTCCATTTGACGA 487
BSNT_03497___ 488 TGGGGTTTGTCCGATGCTTCGGCAAAGGAAGAAAAGAACGGATTGTGCCA 537
||||.||||||||.||||||||.|||||..|.|||||.|||||||||||.
RBAM_021620__ 488 TGGGATTTGTCCGCTGCTTCGGAAAAGGGCGGAAAGAGCGGATTGTGCCG 537
BSNT_03497___ 538 ATTGGTGAAGCCGCCGCTTCCGCCATTGAGGAATATA-TGACAAAAGCCA 586
||||||||||||||..||...||.||.||.|.|||.| ||| ||||||||
RBAM_021620__ 538 ATTGGTGAAGCCGCTTCTCATGCGATAGAAGCATACATTGA-AAAAGCCA 586
BSNT_03497___ 587 GGGGAAAACTGTTAAAAAATAATGTATCTGACGCCCTCTTTTTAAATCAT 636
|.||.|||.|.|||||.||.||.|||.|.||.||.||.|||.|.||||||
RBAM_021620__ 587 GAGGGAAATTATTAAAGAAAAACGTAACCGAAGCGCTTTTTCTGAATCAT 636
BSNT_03497___ 637 CACGGCAAACAGATCAGCCGCCAGGGATTTTGGAAGAACCTGAAAAAAAT 686
|||||||..|||||||||||.||||||||.|||||.|||||.||||||||
RBAM_021620__ 637 CACGGCAGGCAGATCAGCCGTCAGGGATTCTGGAAAAACCTAAAAAAAAT 686
BSNT_03497___ 687 CGCGTTGGAAGCCGGCATTAAGAAAGAGCTGACTCCGCATACACTCAGGC 736
|||..|.|||||.||.|||||.|||||||||||.|||||.||.|||.|||
RBAM_021620__ 687 CGCACTTGAAGCGGGGATTAAAAAAGAGCTGACACCGCACACGCTCCGGC 736
BSNT_03497___ 737 ATTCCTTTGCGACGCATCTGCTTGAGAACGGGGCAGATTTAAGAGCGGTG 786
|.||||||||.|||||.|||||.||.||||||||.|||.|..|.||.|||
RBAM_021620__ 737 ACTCCTTTGCAACGCACCTGCTCGAAAACGGGGCGGATCTGCGCGCCGTG 786
BSNT_03497___ 787 CAGGAAATGCTCGGTCATGCGGATATATCCACAACGCAAATTTATACGCA 836
|||||.||||||||.|||||.|||||.|||||.|||||||||||||||||
RBAM_021620__ 787 CAGGAGATGCTCGGACATGCCGATATTTCCACCACGCAAATTTATACGCA 836
BSNT_03497___ 837 TGTGACGAAAACAAGGCTGAAGGATGTGTACAAGCAGTTTCATCCGCGAG 886
||||||||||||||||||||||||.||||||||.||||.|||||||||.|
RBAM_021620__ 837 TGTGACGAAAACAAGGCTGAAGGACGTGTACAAACAGTATCATCCGCGCG 886
BSNT_03497___ 887 CATAG 891
|.|||
RBAM_021620__ 887 CTTAG 891
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