Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03494 and RBAM_021600

See DNA alignment / Visit BSNT_03494 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence pep-align/BSNT_03494___punA.1.9828.seq
#    -bsequence pep-align/RBAM_021600___punA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03494___punA-RBAM_021600___punA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03494___punA-RBAM_021600___punA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03494___punA
# 2: RBAM_021600___punA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity:     232/272 (85.3%)
# Similarity:   255/272 (93.8%)
# Gaps:           1/272 ( 0.4%)
# Score: 1205.0
# 
#
#=======================================

BSNT_03494___      1 MKDRIERAAAFIKQNLPESPKIGLILGSGLGILADEIENPVKLKYEDIPE     50
                     ||.:|||||||||:::.|:||||||||||||:||||||..|||.||.||:
RBAM_021600__      1 MKQKIERAAAFIKEHVKETPKIGLILGSGLGVLADEIEGAVKLTYETIPD     50

BSNT_03494___     51 FPVSTVEGHAGQLVLGTLEGVSVIAMQGRFHFYEGYSMEKVTFPVRVMKA    100
                     ||||||||||||||:||||||.|||||||||:||||||::||||||||||
RBAM_021600__     51 FPVSTVEGHAGQLVMGTLEGVQVIAMQGRFHYYEGYSMDQVTFPVRVMKA    100

BSNT_03494___    101 LGVEALIVTNAAGGVNTEFRAGDLMIITDHINFMGTNPLIGPNEADFGAR    150
                     ||||:|:|||||||:||||||||||||||||||.|||||||||||:||.|
RBAM_021600__    101 LGVESLVVTNAAGGINTEFRAGDLMIITDHINFTGTNPLIGPNEAEFGPR    150

BSNT_03494___    151 FPDMSSAYDKDLSSLAEKIAKDLNIPIQKGVYTAVTGPSYETPAEVRFLR    200
                     |||||.||||:||.||||.|.:|.||:|||||||||||||||||||||||
RBAM_021600__    151 FPDMSEAYDKELSGLAEKTADELGIPVQKGVYTAVTGPSYETPAEVRFLR    200

BSNT_03494___    201 TMGSDAVGMSTVPEVIVANHAGMRVLGISCISNAAAGILDQPLSHDEVME    250
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
RBAM_021600__    201 TMGSDAVGMSTVPEVIVANHAGMRVLGISCISNAAAGILDQPLSHEEVME    250

BSNT_03494___    251 VTEKVKAGFLKLVKAIVAQYE-    271
                     :|||||.||||||||:||:.: 
RBAM_021600__    251 MTEKVKGGFLKLVKAVVARSQK    272


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